Gene Tgr7_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2458 
Symbol 
ID7317160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp2608809 
End bp2609459 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID643617362 
Productribonuclease T 
Protein accessionYP_002514523 
Protein GI220935624 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.802877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA CATCCGACTT CATCCCCCTG GCTCAGCGCT TCCGGGGCTT CCTGCCGGTG 
GTGGTGGACG TGGAGACCGG CGGCTTCAAC CCGCGCACCG ACGCCCTGCT GCAGGTGGCG 
GCGGTGCTGC TGCGCATGGA CCCCGAAGGT CAGCTGTACC GGCACCAGAC CCTGTCCTTC 
CACGTTCAGC CCTTCGAAGG GGCCAACCTG GACCCCAAGT CCCTGGAAGT GAACGGCATC 
AATCCCTGGC ACCCGCTGCG CATCGCCCAC CCCGAAAAGG ACGCCCTGGC CACGGTATTT 
CGCGGCGTGC GCGAGGAGAT GAAGCTCAAT GCCTGCAAGC GCGCCATCCT GGTGGGGCAC 
AACGCCGGCT TTGATCTTTC CTTCATCCAC CAGGGCGCGG AACGGGCCGG GCTCAAGCGC 
AACCCCTTCC ATCCCTTCAG CAGCCTGGAC ACGGTGACCC TGTCGGCCAT GGCCTTCGGC 
CAGACGGTAC TGGCCCGCGC GGTACAGGCG GCGGGCATGG AATGGAGCAA CAGCGAGGCC 
CACTCCGCCG TCTACGACGC CGAGAAGACC GCCGATCTCT TCTGCCACGT GATCAACCGC 
TGGGGACCGG TGGCCATGCC GCCCGTCGAT ACGCTCATGG ACAAGGCCTG A
 
Protein sequence
MSETSDFIPL AQRFRGFLPV VVDVETGGFN PRTDALLQVA AVLLRMDPEG QLYRHQTLSF 
HVQPFEGANL DPKSLEVNGI NPWHPLRIAH PEKDALATVF RGVREEMKLN ACKRAILVGH 
NAGFDLSFIH QGAERAGLKR NPFHPFSSLD TVTLSAMAFG QTVLARAVQA AGMEWSNSEA 
HSAVYDAEKT ADLFCHVINR WGPVAMPPVD TLMDKA