Gene Tgr7_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2438 
Symbol 
ID7317140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2581888 
End bp2582592 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID643617342 
ProductERCC4 domain-containing protein 
Protein accessionYP_002514503 
Protein GI220935604 
COG category[L] Replication, recombination and repair 
COG ID[COG1948] ERCC4-type nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.41003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCACG ATTTCAACAA ACGGCCGATC GCCATCACCA TCGACCACCG CGAATCCAGG 
AGCCCGGTGG TGGCCGCGCT GCGCGCATCG GCTGGGGTCG CCGCGACCTT CGCCCGGCTC 
GATTGCGGCG ACTATTTGAT CGACAACCGC TTCCTCGTCG AGCGCAAGAC GCTCCCCGAC 
CTCATCGAGT CGATCAAATC AGGACGGCTG TTCGATCAGG CCCTGAGGCT GGCCGCGGTC 
GAACAGTGGC GCCCGGCCCT GATACTGGAA GGCACGGCAA GGGACATCGA AGGCAGCGCC 
ATGCGCTGGG AGGCGGTTCA GGGGGCCCTG GTCACGGTGA GTCTGTTTAT CGGCCTGCCG 
GTCCTGCGCA CTCGTTCGGC GGGGGAGACC GTCGGGACGT TTCTCTCCAT TGCCCGTCAG 
GGCCGCACCG TGGCCGGCGG TGCGCTGCCG CGCCGCGGTG CCCGACCCAA GGGCAAGCGG 
GCCCTGCAAT CCCACATCCT CCAGAGCCTG CCCCGGGTCG GTGCCGAGCG TGCGGCACGG 
CTGCTCGACC GGTTCGGTTC CGTCGAGGCC GTCATCCGGG CGGGTGACGC GGAGTTGAAG 
GAGGTGGATG GGATTGGGCA ACGAACTGCT CGCTGTATCC GCTGGGCCGT GGAGGAGAGC 
AGGGGCCCTT ATGCGGTGGA TGGCGGTCGG CGTTGTCTCG TTTGA
 
Protein sequence
MDHDFNKRPI AITIDHRESR SPVVAALRAS AGVAATFARL DCGDYLIDNR FLVERKTLPD 
LIESIKSGRL FDQALRLAAV EQWRPALILE GTARDIEGSA MRWEAVQGAL VTVSLFIGLP 
VLRTRSAGET VGTFLSIARQ GRTVAGGALP RRGARPKGKR ALQSHILQSL PRVGAERAAR 
LLDRFGSVEA VIRAGDAELK EVDGIGQRTA RCIRWAVEES RGPYAVDGGR RCLV