| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2035 |
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| Symbol | |
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| ID | 7316424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2163363 |
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| End bp | 2164712 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643616927 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_002514102 |
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| Protein GI | 220935203 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0275418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA CCAAGATCAT CGCCCTGGAC GACGACCCCA CCGGTTCTCA GACGGTGCAC
AGCTGCCTGC TGCTGACCCG CTGGGACGTG GCCACCCTGC GCCAGGCGCT GCGGGACGCC
TCGCCCATCT TCTTCGTGCT GACCAACACC CGGGGCATGG ACGCCCATCG GGCGGCACAG
ATCACCCGCG AGGTCTGCGC CAATCTCAGG CAGGCACTGG CCGAGGAGGC CGCCGCCGGA
CACCCGGTCA ACCCGGTGAT GGTGAGCCGC TCCGATTCCA CCCTGCGGGG TCACTACCCG
GTGGAGACCG ACGTGATCGC CGAGGCCATG GGCCCGTTCG ATGCCCACTT CCTGGTGCCC
GCATTCATCG AGGCCGGACG CATCACCCGG GACTCGGTGC ACTACGTGGT CCAGGCCGGC
AAGCCCGTCC CTGCCCACGA GACGGAATTC GCCCGGGACT CGGTGTTCGC CTATCGCCAC
AGCTACCTGC CCGACTACGT GGCGGAGAAG ACCCGCGGAC GCATCCCCGC CGAGACCGTG
CAGCGTTTCA CCCTCGCCGA CCTGCGCGGC GACGTGACCG ACCGGCTCAT GGCCCTGGAA
GGCAACGCCT GCGCCGCGGT GGACGCGCAG ACCCAGGCGG ATCTCGAGCG CTTCGCCGAT
GCCGTGCTGA CGGCGGCGGC ACGAGGCAAA CGCTTCCTGT TCCGCAGCGC CGCCAGCCTG
CTCACCGCCC TGGCCAGGCT GCCCGCCCAG CCCGTGCCCG CCGAGGCCAT GTCCCGCTAC
GTGCGTGGCG GCCGCCCTGG CGCGGTCATC GTCGGCTCCC ATGTGAAAAA GACCACCCAG
CAGCTGCACC GCCTGCTGGA GACACCGGGC ACGGCGGGCG TGGAGATCGA CGTCAACCGG
CTGCCCGGGG AACGGGACGC CGTGCTGCGC GAGACCCTGG CGGCCATCCA GGCGATCCAC
GAGCGGGGCG ACACCCCCGT GGTCTACACC AGCCGCGCCG AGCGCCAGTT CCCGGACCAG
CAGACCCGGC TTGCCTTCGG CGAACAGGTC TCGGCCCTGC TCATGGACGT GGTGCGCGGC
CTGCCCGCGG ACATCGGCTA CCTGATCAGC AAGGGCGGCA TCACCTCCAA CGACACCCTG
AGCACCGGGC TGGCCCTGGC CACCTCGCGG GTGCTGGGCC AGATCCTCAC CGGCTGCTCC
GTGGTGCGCT GCCCCGACGA CCATCCCCGC TTCCCGGGCC TGCCGGTGGT GATCTTCCCG
GGCAACGTGG GCGACGAACA CGCCCTGGCC GAGGCCTACC GTAGACTCGC CCTGCCGGGC
GACGGTCACC GGCATCAAGC GGCCGGCTGA
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| Protein sequence | MSDTKIIALD DDPTGSQTVH SCLLLTRWDV ATLRQALRDA SPIFFVLTNT RGMDAHRAAQ
ITREVCANLR QALAEEAAAG HPVNPVMVSR SDSTLRGHYP VETDVIAEAM GPFDAHFLVP
AFIEAGRITR DSVHYVVQAG KPVPAHETEF ARDSVFAYRH SYLPDYVAEK TRGRIPAETV
QRFTLADLRG DVTDRLMALE GNACAAVDAQ TQADLERFAD AVLTAAARGK RFLFRSAASL
LTALARLPAQ PVPAEAMSRY VRGGRPGAVI VGSHVKKTTQ QLHRLLETPG TAGVEIDVNR
LPGERDAVLR ETLAAIQAIH ERGDTPVVYT SRAERQFPDQ QTRLAFGEQV SALLMDVVRG
LPADIGYLIS KGGITSNDTL STGLALATSR VLGQILTGCS VVRCPDDHPR FPGLPVVIFP
GNVGDEHALA EAYRRLALPG DGHRHQAAG
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