| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2032 |
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| Symbol | |
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| ID | 7316421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2157327 |
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| End bp | 2158487 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643616924 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_002514099 |
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| Protein GI | 220935200 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.311519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACAA AAGACGATAA CGGAACCGGA ATTGTCACCG GGGCCGCGCA GGAGGGTTCC
CAGACCACAT CCCGGCGCGG TTTTCTCAAG GCCAGCGCGG CACTGGGCGC CGGCGCCATT
CTCGGTGCGC CCTACATCGG CAACGCCCAG ACCGCCCGCG GCGTGCGCTG GCGCATGCAG
AGCGCCTGGC AGCCGGGCAC CATCGGCTAC CGCACCTTCG AGACCTGGTG CCGTTCCATC
CAGGAACTGA CCAGCGGCGA ATTGTCCATC GAACCGTTCC CGGCCGGCGC CGTGGCCGGC
ACCTTCGAGA TGGCCGACGC GGTGCGCAGC GGCGTGCTGG ACGGCATGAA CTGGTTCACC
GTGTACTGGC CCGGCAAGAT GCCGGCGGGC GTGTTCATGA GCGCCTACCC CATGGCACTG
AGCCTGCCCC ACCACTGGGA CATGATGTTC GATTCCTTCG GCGGTCGGCA GATCGTGGAT
GAACTCTATG ACCGCCAGGG CCTGGTGTTC CTGGGCCACG TGCAGCACGA CCTGAACCTG
ATTCACTCCA AGGTGCCCCT GCGCAGCTTC GATGACTTCC GCGGCAAGCG CATCCGCTTC
CCCGGTGGCA TCATCGCCGA GACCTTCGCC AAGGTGGGCG TGCGCACGAC CCTGCTGCCC
GGCGGTGACG TCTACCCGGC CCTGGAGCGC GGCACCATCG ACGCGGCCGA CTTCGTGGGT
CCGGCGGTGA ACTACGACCT GGGTTTCCAC CAGGTGGCCG ACTACATCAT CATGGGTCCG
CCCTCCACCC CCTGCCTGCA CCAGCCGGTG GACCTGATGG ACATCTCCGT CAACAAGCGC
TCCTGGAGCC GCATCTCAGA GCACACCCAG AAGCTCATGT ACAAGTTCGT CAAGGCCTAC
TCGGCGGAGC ACTTTGCCGC CATCCAGAAG GCCAACCACG AGGCCTGGCC CAAGTACAAG
GAGGCCGGCG TGGAGGTCAT CCACCTCTCC GAGGAAGACG CCGCGCGCTT TCGCGAGGCC
GCCATCCCCC TGTGGTTCGA ATGGGCCAAC AAGGACCGGG ATGCCGCGCG CCTGTTCAAG
GTCCACCTGG AGGTCATGCA GGATCCCAGC GTCGCCGTCA TCACCCCGGA CGACATCAAG
GACTACAAGC TGAACTTCTA G
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| Protein sequence | MSTKDDNGTG IVTGAAQEGS QTTSRRGFLK ASAALGAGAI LGAPYIGNAQ TARGVRWRMQ
SAWQPGTIGY RTFETWCRSI QELTSGELSI EPFPAGAVAG TFEMADAVRS GVLDGMNWFT
VYWPGKMPAG VFMSAYPMAL SLPHHWDMMF DSFGGRQIVD ELYDRQGLVF LGHVQHDLNL
IHSKVPLRSF DDFRGKRIRF PGGIIAETFA KVGVRTTLLP GGDVYPALER GTIDAADFVG
PAVNYDLGFH QVADYIIMGP PSTPCLHQPV DLMDISVNKR SWSRISEHTQ KLMYKFVKAY
SAEHFAAIQK ANHEAWPKYK EAGVEVIHLS EEDAARFREA AIPLWFEWAN KDRDAARLFK
VHLEVMQDPS VAVITPDDIK DYKLNF
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