| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1741 |
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| Symbol | |
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| ID | 7315763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1842595 |
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| End bp | 1843740 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643616632 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002513810 |
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| Protein GI | 220934911 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAGC GCACACCCAA GCATGCGCCC AAAGGACTTT CGTGGAAGAC CGTCTGCCGA
TGTGGGGCCA AGACGCTCTT TTTTGTCACT GTGGTGGGTT TCCTGATGGT CCATTCCGCC
CGGGGCGAGG TGCTCACGGT GCAGAGCGTG GCGAGCGCGG ATCACACGCT GGTCAATGGT
CGGGTCATTC CCTTCAGGGA GATCACCCTG CGTGCGCGCC TGCCGGGCAC GCTCCTGCAT
GTGGGGCCTG AGGCGGGTGA TCAGGTGCCG CCGGGCAGCC TGCTGGCCGT GGTCTCCCAT
CAGGATCTGC TCGCCCAGCG CGACGCGCAG ATTGCCACCA TCCGCCATGC GCAGGCGGTC
CTCGAGAACA GCCAGATCCA TTACATGCGC GAAATCTATT CCCCCCGGGG CTCCGGAAAT
TCCATGTTTC CGGGCATGTT CGGACTCATG GACAGCATGA TGGGCAACGG CTTCAACACC
ATGCTGGGCA ACCACCACCC GCTCCTGGAC CGCCACGCCA ATCTCCATGA CAGCAGCGTC
ATGGTGCATC AGGCCCAGAC CGCCATCAGC GCCGCTCAGG CCCGCCTGCG GGAGATCGAG
GTGCGTCTCG CGGATGCCAT GACCGTCGCC CCCATGGAGG GGGTCATCAC CCAACGCCAC
GTCGAACCAG GTGAATACGT GCAGCCCGGT CAAGCCCTGT TCGGTCTCGC GCACACCCGC
TGGTTGAAGG TGGAAGCGGA TGTGCCTACG CGTCTGATGG CCGGTGTCGG CCTGGGTCAG
GAGATTGGGC TGCGCCTGGA TGGACAGAGT GCAACGGTGA ACGGTCGGGT GTCGCGCATT
GCCCCGGGTG CGGACACCCG ATCCCAGACC GTTCGCGTCG AACTGGACCT TCCCGCTGAT
GTGATTGCTT CCGTGGGCCA GATGGCAGAA CTGCGTCTGA CCTCTGCCAT GGACCGAAGC
CATCAGCGTC TTCTGCTCCC CCAGAGCGCC ATCATCCAGC GCGGCAGCCT GCCCTCGGTC
AGGGTCCAGG ACCCGGATGG CAGCCTGCGT CTGCGGGTGG TGCGCCTGGG TGAACGGCTG
GCCGATGGCC GTGTGGAGGT GCTCTCGGGA CTGAGTCCCG GTGACCGGGT GGTGAACGGT
CACTGA
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| Protein sequence | MYKRTPKHAP KGLSWKTVCR CGAKTLFFVT VVGFLMVHSA RGEVLTVQSV ASADHTLVNG
RVIPFREITL RARLPGTLLH VGPEAGDQVP PGSLLAVVSH QDLLAQRDAQ IATIRHAQAV
LENSQIHYMR EIYSPRGSGN SMFPGMFGLM DSMMGNGFNT MLGNHHPLLD RHANLHDSSV
MVHQAQTAIS AAQARLREIE VRLADAMTVA PMEGVITQRH VEPGEYVQPG QALFGLAHTR
WLKVEADVPT RLMAGVGLGQ EIGLRLDGQS ATVNGRVSRI APGADTRSQT VRVELDLPAD
VIASVGQMAE LRLTSAMDRS HQRLLLPQSA IIQRGSLPSV RVQDPDGSLR LRVVRLGERL
ADGRVEVLSG LSPGDRVVNG H
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