| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1642 |
|---|
| Symbol | |
|---|
| ID | 7316955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1754174 |
|---|
| End bp | 1755727 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643616534 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002513712 |
|---|
| Protein GI | 220934813 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4373] Mu-like prophage FluMu protein gp28 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGC CCGCCCGCGT GCCCGCCACC CACGAAGCCG CCGCGCCGCC GCCGGTGCTG
CTGGACTATC AGCAGGCGTG GATCGCCGAC GACAGCCAGC TCAAGGTCAG CGAGAAAAGC
CGGCGTACCG GCCTGACCTG GGCCGAGGCC GCCGACGACG TGCTGATCGC CGCCGCCGCC
AAGCGCGCGG GCGGCATGAA CGTCTACTAC ATCGGCTACA ACCAGGACAT GGCCATCGAG
TACGTGGAGG CCTGCGCGAT GTGGGCGCGG GCCTTCAACC ACGCCGCCAG CGCCGTCGAG
GAGGGGATCT GGGACGACGC CAGCGACGAC AAGCACATCA AGACGTTCAC CATCCGCTTT
CCCGACAGTG GCCACCGTAT CGTGGCGCTC TCCAGTCGCC CGGCCAACCT GCGCGGCAAG
CAGGGGGTGG TGGTGATCGA CGAGGCGGCG TTCCACGACA GGCTCGGCGA GCTGCTCAAG
GCGGCCCTGG CGCTGTTGAT CTGGGGCGGC AAGGTGCGCG TGATCAGCAC CCACAACGGC
GACAAGAACC CGTTCAACCA GCTGATCGAC GACATCCGCA GCGGCCGTCG GCGCGGCAGC
GTGCAGCGCA TCACCTTCCG TGAGGCGGTG GCCCAGGGGC TCTATCGGCG GGTGTGCCTG
CGCCTGGGCG AGACCTGGAG CGCCGAGGCC GAGGCCGAGT GGGTGGCCGG CGTGTACGCC
TTCTACGGCG AGGCGGCGCG CGAGGAGCTG GACGTGGTGC CGTCCGAGGG CGAGGGCAAC
TACCTGCCCA GGGCGCTGAT CGAGTCGCGC ATGGTGCCGG CCCCGGTGCT GCGCCTGCGC
AAGGACGACG AGTTCAAGCA CTGGCACAAG GCGGCGCGCG AGGCGGAGAT CCGCGACTGG
TGCGAGGAGC AGCTAAAGCC GCTGCTGCTG GCCCTGCCCG ACGATCTGTG GATCGCCTTC
GGCCAGGACT TCGGCCGCAC CGCGGATCTC TCGGTGATCA TCCCGCTGGT GATCGGCCAG
GACCTGGTGC GCCGGGCGCC CTTCGTGGTG GAGCTGGCCA ACATGCCGTT CGAGCAGCAG
CGCCAGGTGC TGTTCTACCT GTGCGATCGC TTCCCGCGGT TCCAGGCCGG CGCCCTGGAT
GCCACCGGCA ACGGCGCCTA CCTGGCCGAG GTGACGGCCC AGGCCTACGG CGCCCACCGG
GTAGAGGAGA TCAAGCTGTC GCAGGGCTGG TACCGGGAGA ACATGCCGGT GCTCAAGGCG
GCCTTCGAGG ATGGCGACAT CGAGCTGCCC CGCGACAGCC ACCTGGTGGA TGACCTGCGG
GCGATCCGCA AGGTGGATGG CGTGGCCATG GTGCCGCGCA ATAGCCGCCA GGAGGGGCGT
CACGGCGACG CCGCCATTGC CCTGGCGCTG GCCTACTACG CCAGCCGCCG CGACCCGGCG
CCGATCGAGT TCCAGGCGGC GCCGGCCCGG CGCGATCGCT GGGACGAGGT GGCCGGCGAC
GGCTTCGACA TGCTGGACGA CATCAACGCT GCAGGAGGGG ATGGCGCATG GTAG
|
|---|
| Protein sequence | MNVPARVPAT HEAAAPPPVL LDYQQAWIAD DSQLKVSEKS RRTGLTWAEA ADDVLIAAAA
KRAGGMNVYY IGYNQDMAIE YVEACAMWAR AFNHAASAVE EGIWDDASDD KHIKTFTIRF
PDSGHRIVAL SSRPANLRGK QGVVVIDEAA FHDRLGELLK AALALLIWGG KVRVISTHNG
DKNPFNQLID DIRSGRRRGS VQRITFREAV AQGLYRRVCL RLGETWSAEA EAEWVAGVYA
FYGEAAREEL DVVPSEGEGN YLPRALIESR MVPAPVLRLR KDDEFKHWHK AAREAEIRDW
CEEQLKPLLL ALPDDLWIAF GQDFGRTADL SVIIPLVIGQ DLVRRAPFVV ELANMPFEQQ
RQVLFYLCDR FPRFQAGALD ATGNGAYLAE VTAQAYGAHR VEEIKLSQGW YRENMPVLKA
AFEDGDIELP RDSHLVDDLR AIRKVDGVAM VPRNSRQEGR HGDAAIALAL AYYASRRDPA
PIEFQAAPAR RDRWDEVAGD GFDMLDDINA AGGDGAW
|
|---|
| |