| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1569 |
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| Symbol | |
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| ID | 7316193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1684602 |
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| End bp | 1685849 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643616460 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_002513640 |
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| Protein GI | 220934741 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTCT CCCCCCTTGT CCGCCGCATC CTGCCCCTGC TCATCCTGGC GGCAGGCGTG
ATCGGCTTTC TGATCCTGCG TGCCACGGCG CCCGAGAGCC CGCCCATGGC GGTGGGCGAG
CGGGTCTGGC GGGTCAACAC CGAGACGGTC ACGCCCGCCA CCCTGGCGCC CAGCCTGAGC
CTCTACGGCC ACGTGACCAC GCCCCGCACC GCTAACCTGC GCGCCGCGGT GGAGGCGGAC
GTGCTGGAGA CGCCCGGCGA GGAAGGTCGC AGGGTCGAGG CCGGCCAGGT GCTGGTGCGC
CTGGACGATC GGGAGATCGG CCTGCTGGTG ACCCAGCGGG AGGCGGACGT GGCGGACATC
CGCGCCCAGA TCAGTGCCGA GCGCCTGCGC AACGCCCGGG ACCGGGAGGC GCTCAAGCAC
GACGAGGCCC TGCTGGAGAT CGCCTGGCGC AACGTGGAAC GGGCCCAGGA CCTGTTCGCC
CGCAAGCTGG GCAGCCAGAG CGCCCTGGAC GAGGCGCGGC GTGCCCACGA GCAGCAGGCG
CTCGCGGTCA ACGCCAGGCG CCTGGCGCTG GAGGATTTCC AGGCCCGGCT GGCCCAGCTG
GAGGCCCGTG CCCGGCGCGC CGAGGCGCTG CTGGAGGATG CGCGCCTGGA CCTGGAACGC
ACCCGCGTGC GCGCACCCTT CGCCGGCCGC GTGTCCCGAC TGGCCGTCGC CCCCGGTGAC
CGGGTGCGCA TCGGCGATCC GCTGGCGACC CTGTTCGATG CCGATGCCCT GGAGGTTCGC
GCCCGCATCC CCGCCCTGTA TCTGCCGGTG GTGCGCCGCG GCCTGGATGC CGGTGAGCCC
CTGTCGGCCC GGGGCGAGAT CGACGGCGAA CACGTGGTGC TGGAACTGAG CCGCCTGGCC
GGCGAGGCGC CTGCCACCGG TGCCGGCGTG GAAGGCCTGT TCCGCATCAC GGAGGGCGGC
GAACACGCAC CGCTGGGGCG TTTCCTGACC GTGCATCTGC GTCTGCCGGA AGCGGCAGAT
GTGGTCGCCC TGCCCTTCGA GGCCCTGTAC GGCATCGACC GGGTCTACCG GATCGAGGAA
GGCCGCATGC GCGCCATCAC CGTCGAGCGG CGCGGCGAGT GGCTCGATGA CAACGGTCGA
GAACGGGTGC TGGTGTACAG CCCGGAGATC CGTGACGGCG ACCGGCTGGT GACCACCCGT
CTGCCCAATG CATTGGACGG CCTGCGGGTC GAGACGGACT GGGACTGA
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| Protein sequence | MSLSPLVRRI LPLLILAAGV IGFLILRATA PESPPMAVGE RVWRVNTETV TPATLAPSLS
LYGHVTTPRT ANLRAAVEAD VLETPGEEGR RVEAGQVLVR LDDREIGLLV TQREADVADI
RAQISAERLR NARDREALKH DEALLEIAWR NVERAQDLFA RKLGSQSALD EARRAHEQQA
LAVNARRLAL EDFQARLAQL EARARRAEAL LEDARLDLER TRVRAPFAGR VSRLAVAPGD
RVRIGDPLAT LFDADALEVR ARIPALYLPV VRRGLDAGEP LSARGEIDGE HVVLELSRLA
GEAPATGAGV EGLFRITEGG EHAPLGRFLT VHLRLPEAAD VVALPFEALY GIDRVYRIEE
GRMRAITVER RGEWLDDNGR ERVLVYSPEI RDGDRLVTTR LPNALDGLRV ETDWD
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