| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1525 |
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| Symbol | |
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| ID | 7318012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1635146 |
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| End bp | 1636045 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616416 |
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| Product | putative phytoene synthase-like protein |
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| Protein accession | YP_002513596 |
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| Protein GI | 220934697 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGCCC CACCCGACCG TGAGATCCGC CGGGCCTATG CCCAGTGTAT AGACAAGGCC
CGGGCCCATT ACGAGAACTT CCCCGTGGCC TCCCGCCTGC TGCCGGCCCG GCTGCGCGGT
CCCGTGGCGG CCATCTACCT GTTCGCCCGC CGTGCCGATG ACCTGGCCGA CGAGGGTTCG
CTGCCCGCCG AGGCGCGCCT GCGTGCCCTC GATGAACTGG AGCAGCAGCT GCTGGCCGCC
GCGGAGTCCC GGCTGGATGA CGATCCTGGC TTCCTGGCCC TGGCCCATGC CATCCGCAGC
CATGGGCTTC CTGTCGCCCT GTTCCAGGAT CTGCTCAATG CCTTCCGCCA GGACGTGAAC
AAGAAGCGCT ATGGGGACTT CGGCGAACTG ATGCAGTACT GCCGGCTGTC CGCCAACCCG
GTGGGGCGCC TGCTGCTGCA CCTGGTGGGT CACACGGACA AGCGTTCACT GGCCTGGTCC
GATGCGATTT GTTCCAGCCT GCAACTGATC AATTTCTACC AGGACCTGAG CCAGGACTAT
CACGAGATGG GTCGCATCTA CCTGCCCCAG GACGAGATGG CCCGCTTTGG CGTCACCGAA
CGGCACATCG CCGAGGCCAT CTCCGACATG AGTATGCAGC GCCTCATGCA CCTGCAGTTT
ACCCGCGCCG ATCGGCTGCT GCGTTCCGGT GCGCCCCTGG GCGGGGTGCT CAAGGGTCGC
TTCGGTCTGG AGATTCGCCT CATCACCCTG GCCGGTGCCC GGGTGCTCTG GCATCTCAGG
CGTCAGCAGT CGAACCTGTT CTCACGGCCC CGTCTGCGCC TGGCCGATTA CGCCGTCATC
CTGCGCGGTG CCCTGTTCCC GGCGCGCGCC GCCCGCATCG CCACTGCGAG AACACCATGA
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| Protein sequence | MPAPPDREIR RAYAQCIDKA RAHYENFPVA SRLLPARLRG PVAAIYLFAR RADDLADEGS
LPAEARLRAL DELEQQLLAA AESRLDDDPG FLALAHAIRS HGLPVALFQD LLNAFRQDVN
KKRYGDFGEL MQYCRLSANP VGRLLLHLVG HTDKRSLAWS DAICSSLQLI NFYQDLSQDY
HEMGRIYLPQ DEMARFGVTE RHIAEAISDM SMQRLMHLQF TRADRLLRSG APLGGVLKGR
FGLEIRLITL AGARVLWHLR RQQSNLFSRP RLRLADYAVI LRGALFPARA ARIATARTP
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