| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1424 |
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| Symbol | |
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| ID | 7315133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1523476 |
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| End bp | 1524549 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616314 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_002513496 |
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| Protein GI | 220934597 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.240665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAGA CCTCCATGAT GACCTTGCTC AAGTCGGCTA CGAGGCGCGC CTCTGGGCTC
GCCCCCCGCC GAAGCCACTG GATGGTGGCA GCCCAGTGTG CACTGATCGT GTTGCTGGCC
ACGGCGCCCG TGGCGGCTCA GAACCTCTCC AGTTCTCTGT TGCGCATCGA GATGATGCAG
GCGAAGGGTG GTGACCCGGA GGCGCAGTTC ACCCTGGGGG CCCGTTACGA GGACGGCAAC
GGGGTGGAGA AGAATCCGGC CGAGTCCCAT CGCTGGTATT CCCTGGCGGC CAATGCCGGG
CATGCCGGCG CCCAGTTCCG GCTGGGGCGG CTCCATGAGC TGGGAATCGG TGTGCCCGCC
TCCTCGGAAA CCGCCCAGGA ATGGATCAGG CTCGCGGCCA GCAACGGCCA CGAGGGTGCC
CGCCAGCACC TGGCGGCCCA GGAGCGTGAG CGTGTTGCGG AGGAGGCCCG TGCCGCCCAG
CGTGCCCTGG CCACCACCGC ACCACGGCCT GCACCCCGGC CCGCACCGGC ACCACAGCCT
GCGCGGACCG AGGCCCCGGC TGCTGTTGCG TCCGCACCGC GGCCGCCTGC CCCCGAACCC
GAAGTGCGGC CCCAGCCGGC GGCACAGGCC CCGGCCCCCG CACCGGCGGC TCCGGAGCCC
GCAGCGCCTG CCATGCCCGA CATCCGCGAC GTGGTGGTCA ACGCCAGCTG GTCGAACGCA
GGCACGCCTG CCCTGTACCT TCCTTCCACG ACCACCAGCT GCGTGGTTTC CGGTGAGGAA
GTGGTGTGTT TCTCCCGGGA GCAGATGCGC CGGCTGGAAG GCCAGGAAGT GACCTTCATC
ACCCGGACCA CCCTGTCGGA CTTCAACGCC GAAGGCTCAT TCAGGGTCAG TTTCATCCAC
AACGTGGTGG ACCTGAGAAG ACGTGGTCAG GGACCCGACG ATCCGGTGCC GGAAGGTCTG
CGTGCGGAGC GCGGCTGGCT TGATCCGGCG ATCTCACTGC GGTGCCAGGC CGCCTCTCGC
AATGAGGTGC GCTGCGAGGG CAGTGCGGGT GAACGGGTCT TCCTGAACCA GTGA
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| Protein sequence | MFKTSMMTLL KSATRRASGL APRRSHWMVA AQCALIVLLA TAPVAAQNLS SSLLRIEMMQ
AKGGDPEAQF TLGARYEDGN GVEKNPAESH RWYSLAANAG HAGAQFRLGR LHELGIGVPA
SSETAQEWIR LAASNGHEGA RQHLAAQERE RVAEEARAAQ RALATTAPRP APRPAPAPQP
ARTEAPAAVA SAPRPPAPEP EVRPQPAAQA PAPAPAAPEP AAPAMPDIRD VVVNASWSNA
GTPALYLPST TTSCVVSGEE VVCFSREQMR RLEGQEVTFI TRTTLSDFNA EGSFRVSFIH
NVVDLRRRGQ GPDDPVPEGL RAERGWLDPA ISLRCQAASR NEVRCEGSAG ERVFLNQ
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