Gene Tgr7_1317 details

Gene Information

• Locus tag: Tgr7_1317
• ID: 7317808
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1416278
• End bp: 1416817
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643616206
• Product: protein of unknown function DUF1568
• Protein accession: YP_002513389
• Protein GI: 220934490
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1943] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.737296
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGGCT ATCGAAGGCT TTATATCCCC GGCGGTTGTT ACTTCTTCAC GGTCGTCACG 
CAGGATCGCC GTCCCATTCT GACTGAACCT GCCGCGATTC AGCGGCTCCG CGAGGCGGTC 
CGCAGGACCA TGGCTGCGCA TCCGTTTCAG ATCGATGCCC TGGTGATCCT TCCTGATCAT 
CTTCATGCTG TGTGGCGCCT TCCGGATGGT GATCAGGATT TCACGTCGCG ATGGCGCAAG 
ATCAAACATT ATTTCAGCAT TGGTCAGGCT CCAGGCCAGA CGCGGGATTC TCTGGCAAGA 
CGCAGGGAGA AGGGTGTCTG GCAGCGCCGG TATTGGGAGC ATGCCATTCG GGATGAGCTG 
GATTGGCGAC GGCATATTGA TTATGTGCAC TACAACCCTG TGAAACACGG CTATGTCCCC 
AGTCCTGGAG ATTGGCCACA CAGTTCATTT GGCAGGGCCA TGCGTATGGG GTGGTATCCC 
GAAGGGTGGG GGACGTCGGT ACCCGTGGTG GTGAAGGGCA TGAGGTGTGT GGGGGAATGA 

 

Protein sequence

MTGYRRLYIP GGCYFFTVVT QDRRPILTEP AAIQRLREAV RRTMAAHPFQ IDALVILPDH 
LHAVWRLPDG DQDFTSRWRK IKHYFSIGQA PGQTRDSLAR RREKGVWQRR YWEHAIRDEL 
DWRRHIDYVH YNPVKHGYVP SPGDWPHSSF GRAMRMGWYP EGWGTSVPVV VKGMRCVGE