Gene Tgr7_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1286 
Symbol 
ID7317775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1381244 
End bp1381810 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content72% 
IMG OID643616174 
Product2'-5' RNA ligase 
Protein accessionYP_002513359 
Protein GI220934460 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.757621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGA CCCTGGACAC ACCCCAGCGA CTGTTCTTCG CCCTCTGGCC CTCGGATGAA 
GCGCGCGCGG CCCTGGCCGG CTGGCGGGAT GCCCTGCCCC GGCCGGGTGG GCGACCCACG 
GCTGCGAGAA ACCTGCACCT GACCCTGGCC TTCGCCGGCG ACGTGGACGC CGAGACCCGA 
ACCTGCCTGG AGCAGGCGGC GGCCCGGGTG CGGGGCGAAC CCTTCAGCCT GCCGCTCGAC 
CGGCTCGGCG TGTTCAAACG GGGGCTGCTC TGGACCGGCC CCGCGGACTG CCCGGCGGCG 
CTCTCGACCC TGGCCGGCGA TCTGGCCGGG GTCCTGCGGG ACTGCGGCGT TCGCCCCGAC 
CCGTGTCCCT TTCATGCCCA CATCACCCTG ATCCGCCGCA TGAACGGCCG TCTGCCCGGG 
GTGGATCCGC CCGGCCTCAC CTGGCAGGCA AAGGCCTTCT GCCTGGTGCG CTCCCGGCCC 
GGACAGGGTT ACGAGGTGCT CAAAACCTAT CCCCTGCAGG GCGCGCCACC GGGCTCGCTT 
TCGGAGCGCT CCGGTTCTAT GGGATAA
 
Protein sequence
MEETLDTPQR LFFALWPSDE ARAALAGWRD ALPRPGGRPT AARNLHLTLA FAGDVDAETR 
TCLEQAAARV RGEPFSLPLD RLGVFKRGLL WTGPADCPAA LSTLAGDLAG VLRDCGVRPD 
PCPFHAHITL IRRMNGRLPG VDPPGLTWQA KAFCLVRSRP GQGYEVLKTY PLQGAPPGSL 
SERSGSMG