Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1260 |
Symbol | |
ID | 7317749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1354338 |
End bp | 1355000 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643616148 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_002513333 |
Protein GI | 220934434 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCATG TCTGGCGCGC GAGGGTCACT GCCTGGTGTC TGTGTTGCCT GTTGTGGCTG GCGGCGCCGG CCGCCGCCTG GTGGGACGAA TCCATGGATG AGTGCCCGCC GGTGCCGCCC GTGACCACCT GGTATGGCGA GATCCGCGAT CGCCTGGCGC GGGATTACCC GGATCGCGCT CTCGATCCCC TGATCGTCGT GCGCATCGGT GAGCAGCGTC TCTACCTGAT CCGTCACGGC GTGCCGTTTC TGGACTACCC CGTGTCCACC TCCAGGTATG GCATCGGCAA CCGGGACGGC AGCCTCAAGA CGCCGCTCGG CGTGCACCAG GTGCGGCGCA GGATCGGCGA GGATGCGCCG CTCGGCACCA TCTTCCGCGG GCGCGCCAAC ACCGGGCGCA TCGCCAACAT CCTCACCACC CCCGAGACCA GCCCCGAGGA CAACATCACC TCCCGTATCC TGTGGCTGGA CGGCCTGGAG GAGGGCGTGA ACCGGGGCGG CGAGGTGGAT TCCTTCCAGC GCTTCATCTA TATCCACGGC ACCGACGAGG AAGGCCTGAT AGGCCAACCG GCATCCGATG GCTGCGTGCG CATGACCAAC GCCGCGGTGA TCGAGCTGTT CGATCAGGTG CCGCTCGGCA CCCTTGTGGT CATCGTCGAG TAG
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Protein sequence | MSHVWRARVT AWCLCCLLWL AAPAAAWWDE SMDECPPVPP VTTWYGEIRD RLARDYPDRA LDPLIVVRIG EQRLYLIRHG VPFLDYPVST SRYGIGNRDG SLKTPLGVHQ VRRRIGEDAP LGTIFRGRAN TGRIANILTT PETSPEDNIT SRILWLDGLE EGVNRGGEVD SFQRFIYIHG TDEEGLIGQP ASDGCVRMTN AAVIELFDQV PLGTLVVIVE
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