| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1205 |
|---|
| Symbol | |
|---|
| ID | 7315457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1296833 |
|---|
| End bp | 1298149 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643616093 |
|---|
| Product | Outer membrane protein-like protein |
|---|
| Protein accession | YP_002513278 |
|---|
| Protein GI | 220934379 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACAC GCACGCTCCA CCTGCTGCTG GCGGCGGGAC TGTTCCCTGC CCTGGCGGCA
GCCACACCGG CGGCCTACGA TCCCGCCACG CCGGTGCCGC CGCCCGCCTA CAGCGCCCTG
CCCGCGACCC TGCCCGGGGC GACCATGGGC GAGGAGGACT GGCGTCAGAG CAATGACACC
GTGGGCGCCT TTACCCGTGG GCACATGGAC GTGTTGCGCT GGGAAGCGGA CACGCTGCCC
GCCGCCGAAC CGGTCTCCCC GCCGTCGGGC GAGCCCCTCA CCCCCGCCGA GGCGTTGCGC
ATGGCCCTGG GCAAGCGCCC GGACCTGTTC GCCACCGAGA CCATGGGCGC CCTGGAGCGG
GCCGAGGCGG ACATCGCCGT GATCGAGTTC TCCCGCGAGG TGCACCGGGC CTGGATCCAG
GCCGTGGCCG CCGAGCAGGG CCTGCGCCGC ACCGAGCAGG CCTTCGAGGC CACCGACCTG
AGCAACGAAC TGGCGGTCCG CATGACCCGG GTGGGCAACT GGGGCCAGGA CCGGCTGCTG
AAGCAGCAAC TGGCCCTGTC CGACGCGGCC ATCCAGCTGG CGCAGGCCCG CCAGGCCGCC
GCCAGCGCCC GGGAGGCGCT GATCCGCACG CTCGGTCTGT GGGGCGATGC CACCGCCCTG
CACCTGCCGG ACACCCTGCC GGCGCTGCCG GAAAGCCCCC TGGAGGCCGA CGCCCTGGAG
ACCCTGGCCC TTGAAAGACA CCCGCGACTG GCCCTGGCGG CCAGGGACGC CGAGTGGGCC
CGGCGCGGTC TGTCCGCCGC CAGCCTGGAG ACCTGGCAGG CGGCGGCCCG GGAGGCCCTG
TCCGTGACAC TGCCCGAGGA CGCCGGCAGC GACGACCCCA TGGGACAGCT CATCACCCGT
GCCCCGTTGC TGGAGCAGCG GCGCCTGCCC GCCCGCCACG AGACCGGTGA GGCACTGCGC
GCCCGGGCCG AGGCCCATGC CCTGGCCGTG CGCATCCGCT CCCAGGTGCG CGAGGCCTAC
CACCAGTACC GGGTGGCCTA CGACATCGCC CGGCTGGCCG GGGAGAACGC GCGCCTGAGC
GAGGCGATCC AGGAGGAGAC CCTGCTGCAG TACAACGGCA TGCTCAAGAG CACCTGGGAC
CTGCTGGCCA GCGCCCGGGA CCGGGTGGAG CGCAGCGACG CCGCCCTGCA GGCCCTGCGC
GACTTCTGGC TGGCCCACGC CAACCTGCAG GCCGTGCTCG CCGGTGCGGA CTACGCCGGA
GCGGACGGCT CCAGTCTCGG CGCGGCATCC AATTCCAAGG CAGCAGGAGG TCACTGA
|
|---|
| Protein sequence | MRTRTLHLLL AAGLFPALAA ATPAAYDPAT PVPPPAYSAL PATLPGATMG EEDWRQSNDT
VGAFTRGHMD VLRWEADTLP AAEPVSPPSG EPLTPAEALR MALGKRPDLF ATETMGALER
AEADIAVIEF SREVHRAWIQ AVAAEQGLRR TEQAFEATDL SNELAVRMTR VGNWGQDRLL
KQQLALSDAA IQLAQARQAA ASAREALIRT LGLWGDATAL HLPDTLPALP ESPLEADALE
TLALERHPRL ALAARDAEWA RRGLSAASLE TWQAAAREAL SVTLPEDAGS DDPMGQLITR
APLLEQRRLP ARHETGEALR ARAEAHALAV RIRSQVREAY HQYRVAYDIA RLAGENARLS
EAIQEETLLQ YNGMLKSTWD LLASARDRVE RSDAALQALR DFWLAHANLQ AVLAGADYAG
ADGSSLGAAS NSKAAGGH
|
|---|
| |