Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0953 |
Symbol | |
ID | 7314984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1030388 |
End bp | 1032058 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643615838 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_002513028 |
Protein GI | 220934129 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCCA TCCGTTTCAT GGTCATCGCC GCGCTGCTGC CCGCGGCCCT CTTGCTGAGC GCCTGCGGCA GCCTCCCCTC TCAACCCGAT GAACCGGAAC GGGTTGAAAT CACTGAAGAA ACCGACACCG TACGACTGGC GGACGCCGAG CAGACCCTGC TCGGCCTGGA GGAAGCAACC CCCTTCCCCG ACCTGACCCC CTCCCGGGAC ATCCCCGTGG GCGAGAGCCC GCCCAGCGAG GACATCTGGG GCCGGGTGCG CGCCGGCATG GGTATGCCCG ATTACCGCCA CCACCCCAGC GTCCAGCCCC ACATCCAGTG GCACCTGTGC CGCCCCGACT TCATCCAGCG GGTGACCGCC CGGGCGGAAC CCCTGCTGCA CTACATCCTG GAAGAGATCG AGGCCCGGGA CCTGCCCACG GAGCTGTTGC TCCTGCCCAT CGTGGAAAGC GCCTACCTGC CCTTCGCCTA TTCCCACGGC CGCGCGGCGG GCATCTGGCA GTTCATCCCC TCCACCGGGC GCCACTTCGG CCTGAAGCAG AACTGGTGGT ATGACGGGCG CCGCGATATT CACGCCTCCA CCACCGCCGC CCTGGACTAT CTGCAGCAGC TCAACCAGCG CTTCGACGGC GACTGGCTGC TGGCGCTCGC CGCCTACAAC GCCGGCCAGG GCACCGTGGC CCGGGCCATC CAGCGGAACG AACGCCTGGG CCGCCCCACG GACTTCTGGA GCCTGGACCT GCCCCGGGAG ACCCGCCAGT ACGTGCCCAA GCTGCTGGCC CTGCGCAGCC TGGTGGAAGA CCCCTGGGCC TACCACGTGG AACTCTGGCC GGTGCCCGAC GAGCCCTACC TGGAACTGGT GCAGCTGGAC GGCCAGCTGG ACCTCGCCGT GGCGGCGCGC CTGGCGGACC TGGACCTGGA AGAGGTCTAC CAGCTCAACC CGGGCTTCAA CCGCTGGGCC ACCGATCCTG AAGGCCCCCA CCACCTGCTG CTGCCCCGCG ACCGCACACC GGCCTTCCGC GAGGGTCTGG CCGCGCTGGA TGCCTCCGAG CGGGTGGTCT GGAACCGCCA CCGCATCCAG GAGGGCGAGA CCCTGATCCA GATCGCCCGC CAGTACCGCA CCACCGTGGC CATGCTGCAG AGCACCAACA ACCTCCGCGG CAGCAACATC CGCGCAGGCC AGTACCTGCT GGTGCCGAGC GCCAGCGAAC CGGCCTCCAC CTACACCCTG ACGGCCGACC AGCGCCGCAC CCAGACCCAG GCGCGCGGGC CGGCCGGCCG GGTACAGCAC CAGCACCTGG TCCAGGCGGG CGACACCTTC TGGGGCCTGT CCCGGCGCTA CAACGTCTCG GTGCAGGAAC TGGCCCGCTG GAACGGCATG GCCCCCGGCG ACACCCTGCG CCCGGGCCAG CGCCTGTCCG TGTGGCTGAG CAGCGACGCC GGTCCGGTGG CCTCGGCGGG TCCGCCGCAG TTGCAGAACC CGGCCGCGCG GCGCCAGACG GTGAACTATG CCGTGCGCCC CGGGGACTCC CTGGCAAGCA TCGGCCAGCG CTTCCAGGTC AGCGTGGCTG ACATCCGCCG CTGGAACAAC CTGGGCAACG GCAATCTGAT CCGCCCCGGA CAGACCCTGA CCCTGCACGT GGACGTCACC AACCAGGGCG GCGGGGCATG A
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Protein sequence | MNPIRFMVIA ALLPAALLLS ACGSLPSQPD EPERVEITEE TDTVRLADAE QTLLGLEEAT PFPDLTPSRD IPVGESPPSE DIWGRVRAGM GMPDYRHHPS VQPHIQWHLC RPDFIQRVTA RAEPLLHYIL EEIEARDLPT ELLLLPIVES AYLPFAYSHG RAAGIWQFIP STGRHFGLKQ NWWYDGRRDI HASTTAALDY LQQLNQRFDG DWLLALAAYN AGQGTVARAI QRNERLGRPT DFWSLDLPRE TRQYVPKLLA LRSLVEDPWA YHVELWPVPD EPYLELVQLD GQLDLAVAAR LADLDLEEVY QLNPGFNRWA TDPEGPHHLL LPRDRTPAFR EGLAALDASE RVVWNRHRIQ EGETLIQIAR QYRTTVAMLQ STNNLRGSNI RAGQYLLVPS ASEPASTYTL TADQRRTQTQ ARGPAGRVQH QHLVQAGDTF WGLSRRYNVS VQELARWNGM APGDTLRPGQ RLSVWLSSDA GPVASAGPPQ LQNPAARRQT VNYAVRPGDS LASIGQRFQV SVADIRRWNN LGNGNLIRPG QTLTLHVDVT NQGGGA
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