| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0900 |
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| Symbol | |
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| ID | 7315924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 971336 |
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| End bp | 972205 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643615780 |
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| Product | HflC protein |
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| Protein accession | YP_002512978 |
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| Protein GI | 220934079 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.219855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCCGCA TCATTGGAAT CGTGGCGGTG GTGTCCGCCA TCATCGTGGG CATGTCCACC
TACACCGTGG ACGAGCGTGA GCGCGTGATC CTGTTCAGCC TGGGTGAGAT CAAGGCCCTG
GACCTTGAGC CGGGCCTGCA CTTCAAGTTC CCCCTGGTGA ACAACGTGCG CAAGTTCGAT
TCCCGGGTAC TGACCCTGGA CATCCCGCCG GACCGCTTCC TTACCAGCGA GGCGAAGAAC
GTCATCGTCG ACTTCTACGC CAAGTGGCGT ATCGACGACG TGGGCCAGTT CTTCCGCTCC
ACCCGCGGCA ACGAGCGCAA CGCCGAGGAC CGCCTGGCGC AGATCCTGCG CGACGGCATG
CGTAACGAGT TCGCCCGCTA CACCCTGGAA CAGGTGGTCT CCGGCGAGCG TCTCACCATC
ATGGGTGCCG TGCGTCAGCA GGCCCTGGAC ACTGCCCGGG AGCTGGGCGT GGTGCTGGTG
GACGTGCGCA TCCGTCGCAT GGACCTGCCC GACGAGGTGA GTGAGTCCGT GTACGAGCGT
ATGCGTGCCG AGCGTCAGCG CGTGGCCCAG GACTTCCGTG CCCGGGGCCG CGAGGAGGCC
GAGCGTATCC GCGCGCGTGC CGACCGCGAG CGCACCGTGA TCCTGGCGGA TGCCTACCGG
GAGTCCGAGC AACTGCGTGG TGAGGGCGAT GCCCGCGCCG CCGAGACCTA TGCTCGGGCC
TTTGGCGAGG ACGAGGAGTT CTTCTCCTTC TACCGGAGCC TGATCGCCTA TCGCAGCACC
ATGACCGGCG ACAACACCAT GTTCGTCATC GAGCCGGATT CGGACTTCTT CCGCTACTTC
GGCAGCCCCA TCGGGGCGCC CCGACGGTAG
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| Protein sequence | MIRIIGIVAV VSAIIVGMST YTVDERERVI LFSLGEIKAL DLEPGLHFKF PLVNNVRKFD
SRVLTLDIPP DRFLTSEAKN VIVDFYAKWR IDDVGQFFRS TRGNERNAED RLAQILRDGM
RNEFARYTLE QVVSGERLTI MGAVRQQALD TARELGVVLV DVRIRRMDLP DEVSESVYER
MRAERQRVAQ DFRARGREEA ERIRARADRE RTVILADAYR ESEQLRGEGD ARAAETYARA
FGEDEEFFSF YRSLIAYRST MTGDNTMFVI EPDSDFFRYF GSPIGAPRR
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