| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0638 |
|---|
| Symbol | |
|---|
| ID | 7316052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 671316 |
|---|
| End bp | 672206 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643615520 |
|---|
| Product | signaling modulator of AmpD, AmpE |
|---|
| Protein accession | YP_002512719 |
|---|
| Protein GI | 220933820 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGA TCACCATCCT CATCGCCCTG TTCCTGGAGC GCTTTGCCGG CACCCTGGAC
GACCTGCGCC AGTTCCGCTG GCTGGACGGT TATGCCAACT GGATCCGTGA GCGCATGGAG
TCCCTGGGCA TCTCGGACGG CACGGCGGTG TTCGTGGCGA CCCTGCTGCC GCCGGTGCTG
CTGCTGGCCA TCGTGGCCCT GCTGGTGCAC GGCGCGGTGC TGGGCCTGCT GGACATCGTG
TTGGGGGTGA TCATCCTGCT GCTGTGCCTG GGTCCGAAGG ATCTCAACGA CCAGGTGGAG
GCCTATGTGG AGGCCGGCGC CATGAAGGAC GAGGAGCGCC AGAAACGCCA CGCCAGGGAC
TTGCTGGGTC AGCAGGAGGT CCCGGAGGAC CTGCGTGAAC GCACCCTGTC GGTGGTCCAG
GCCATGTTCT CCGAGGCCAA CAGCCGCCTG TTCGCCGTGT TGTTCTGGTT CGCCATATTG
GGTCCTCTAG GCGCGTTCAT CTACCGGCTG GGCAGTCTGC TCAAGTCACC CGGCGAAGAG
CGTCCCGAAG GGGTGATGGC CGCCGCCGCC CGCCTGCAGG CGCTCATGGA CTGGATCCCG
GCCCGCCTGT TCGCCCTGGG TTACGCCCTG GTGGGCAGCT TCGACACGGC CTTTGCCGTG
CTGACGCGGT TCCTGCCCGG CAGCTGGGCA AACATGGCCG AGGAGAATAC GAGCCTGCTG
CGGGAGGCCG GTTCCGGGTC CCTGCACCTG GATCACGTGC GTGGCGAACA CTGGGAAGAC
CCCAACGAGA TCAATGCCCT GGTGGAGCGG GCCAACCACC TGATCATGCG TACCCTGGTG
GTGTTCCTGG CCGTGCTGGC CCTGATGACC CTGGCGGGAT GGGCAGGATA G
|
|---|
| Protein sequence | MSLITILIAL FLERFAGTLD DLRQFRWLDG YANWIRERME SLGISDGTAV FVATLLPPVL
LLAIVALLVH GAVLGLLDIV LGVIILLLCL GPKDLNDQVE AYVEAGAMKD EERQKRHARD
LLGQQEVPED LRERTLSVVQ AMFSEANSRL FAVLFWFAIL GPLGAFIYRL GSLLKSPGEE
RPEGVMAAAA RLQALMDWIP ARLFALGYAL VGSFDTAFAV LTRFLPGSWA NMAEENTSLL
REAGSGSLHL DHVRGEHWED PNEINALVER ANHLIMRTLV VFLAVLALMT LAGWAG
|
|---|
| |