Gene Tgr7_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0560 
Symbol 
ID7317908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp590359 
End bp591822 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content69% 
IMG OID643615445 
Producthypothetical protein 
Protein accessionYP_002512644 
Protein GI220933745 
COG category[S] Function unknown 
COG ID[COG2170] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGCCAGG AAATCCAGAA CACCCGTTTC AGCGATCAGG ACTTCGCCCT TTTTCACCAG 
CGCCTGGCCG AGGAGACCCG CCTGGCCCGG GACCTGGAGG CCGCCGGACG CTTCGATGAC
GGCCACCCGG TGGCCGGCTT CGAGATCGAG GCCTGGCTGG TGGACGGGCA CGACGAACCC
GCCCCGGTGA ACCAGGCCTT CCTGGAACGC TTCAAGCACC CCCTGGCGAG CCCGGAACTG
GCCCGCTTCA ACGTGGAGCT CAACACCAGC GCCCGGTCAC TGACCGGCAG CGTGCTCTCG
GACCTGCACC GGGAGATGGG CGAGACCTGG GCGAAGGCCA GGCTGACCGC CCGGGCCTGC
GATGCCGAGC TGGTGCTCAC CGGCATCCTG CCCACCCTGC GCCCGGAGCA CCTGTGCCTG
GCCAACATGT CGGACATGAA CCGCTACCGG GCACTGAACG ACCAGGTGGT GCGTTCCCGC
CAGGGTCGTC CGCTGAAACT GGACATCGTG GGCCGTGAAC ACCTGCACCA CGAACATCAC
GACGTGATGC TGGAGGCGGC CACCACCTCC TTTCAGATCC ACCTGCAGAC CCCCATCGCC
GTGGCCCACA AGGTCTACAA CGCCTCGATC CTGGCCAGCG CGCCCATGGT GGCCCTGTCC
GCCAACGCCC CCTACCTGTT CGGCAAGGAC CTCTGGGACG AGACCCGCAT CCCGGTGTTC
GAACAGGCGG TGGAGGTGGG CGGCTTCGAG GGCGCGTCCC GTGGCCCCCT GCGCCGGGTG
AGCTTCGGTT CCGGCTTCGC CCGGGAGTCC ATCCTGGAGT GCTTCGAGGA GAACCTGGCG
CACTTCCCCG TGCTGCTGCC CATCCACTTC GACGAGCCCC CGTCCCGGTT CAGCCACCTG
CGCCTGCACA ACGGCACCAT CTGGCGCTGG AACCGGCCCC TGATCGGCTT CGACGACCAG
GGCCGCCCGC ACATCCGTAT CGAGCACCGG GTGGTGCCGG CGGGCCCGAC CCTGGCCGAC
AGCGTGGCGA GCGCCGCCTT CTTCTACGGC CTGGTGGAGG AACTGGTGAC CACCCCCGGC
GGCGCGGAGG GTCTGATGGG CTTCTCCAAG GCCCGGGACA ACTTCTACCA GGCGGCCCGC
TTCGGGCTCG ATGCCCACGT GGAATGGCCC GCCGGACGCA GCCGTCCGGT ACGCACCCTG
ATCCTGGAGG AACTGCTGCC CATGGCCCAG CGGGGCCTCG AACGCCTGGG CCTGGACGCC
GACGACAGCG ACCGCTACCT GGACATCGTC CGCGCCCGGG TGGACAGCGG CCAGAATGGC
GCCACCTGGG CGCGGCGCTT CGTGGCCACC CATGGCCCGG ACTTCCACGC CCTGGTGCAC
GCCTACCTGG CCCTGCAGTG CACCGACACC CCGGTGCATC TCTGGCCGGT GCCACAGACA
GCCACCGGGG AGACCCCATG CTGA
 
Protein sequence
MGQEIQNTRF SDQDFALFHQ RLAEETRLAR DLEAAGRFDD GHPVAGFEIE AWLVDGHDEP 
APVNQAFLER FKHPLASPEL ARFNVELNTS ARSLTGSVLS DLHREMGETW AKARLTARAC
DAELVLTGIL PTLRPEHLCL ANMSDMNRYR ALNDQVVRSR QGRPLKLDIV GREHLHHEHH
DVMLEAATTS FQIHLQTPIA VAHKVYNASI LASAPMVALS ANAPYLFGKD LWDETRIPVF
EQAVEVGGFE GASRGPLRRV SFGSGFARES ILECFEENLA HFPVLLPIHF DEPPSRFSHL
RLHNGTIWRW NRPLIGFDDQ GRPHIRIEHR VVPAGPTLAD SVASAAFFYG LVEELVTTPG
GAEGLMGFSK ARDNFYQAAR FGLDAHVEWP AGRSRPVRTL ILEELLPMAQ RGLERLGLDA
DDSDRYLDIV RARVDSGQNG ATWARRFVAT HGPDFHALVH AYLALQCTDT PVHLWPVPQT
ATGETPC