| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0461 |
|---|
| Symbol | |
|---|
| ID | 7316547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 491783 |
|---|
| End bp | 492538 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643615345 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002512546 |
|---|
| Protein GI | 220933647 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1416] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.114453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAT CACACATCGG TGGCGACGAA CACACCCTGA ACGCTCTGGT GGACGGGGAA
CTGGACAGCG CCGCACGCCG GGAGATCCTG CGCCGTCTGC GCGAGGACGA GGAACTGCGC
GGCGTCGCCT GCAGCCTGCG CCACGTGAAG ACCCTGGTGC ATCACGGTTA CACCAGCGCG
GAGCCGCCGC GCCGACGGCG TGAACACCCC ATGCGCCGGG CGATGCGCTT CCCCTCCATG
GCCGCCGCGG CCGTGCTGCT GGGTATCGGT TTCGCCGCCG GCCTGCTGAT CCCCGACAGC
ATCGATCGCC ACAAGCCCGA GGCCTACGTG GCGCACATCC AGGGCCCCGA ACCCGCTGCC
GTAGTCAACG GCGTGCGCAT CGAGCCGCGC CAGGCCCAAC ACAACAAGTT CGTGCTGCAC
GTGAGCCAGG GCGGCGAGCA TCGCTTCGCC GAGGTGCTCG ACCGTGCCGA GAAACTGCTG
GCCGTCTATC CGGGGCCGGG TCTGGAGATC GAGGTGGTGG CCAACTCCGA GGGCTTGGGC
CTGTTCCGCG AGGAGGTCTC CACCCAGGTG GAGCGCATCC GCCTGCTCAC GGAGCGCCAC
GAGAACGTCC ACTTCATCGC CTGCCAGAAC ACCATGGAGG TGTTGCAGCG CCAGGGCGTA
CGCACCCGCC TGATCACCGG CACCAAGACC ACCCAGTCCG CCGTGGATCA CATCATCGAC
CGGCTCCAGG ACGGCTGGGT CTACGTGCGC ACGTAG
|
|---|
| Protein sequence | MDKSHIGGDE HTLNALVDGE LDSAARREIL RRLREDEELR GVACSLRHVK TLVHHGYTSA
EPPRRRREHP MRRAMRFPSM AAAAVLLGIG FAAGLLIPDS IDRHKPEAYV AHIQGPEPAA
VVNGVRIEPR QAQHNKFVLH VSQGGEHRFA EVLDRAEKLL AVYPGPGLEI EVVANSEGLG
LFREEVSTQV ERIRLLTERH ENVHFIACQN TMEVLQRQGV RTRLITGTKT TQSAVDHIID
RLQDGWVYVR T
|
|---|
| |