| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0303 |
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| Symbol | |
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| ID | 7316279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 341647 |
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| End bp | 342780 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643615188 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002512389 |
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| Protein GI | 220933490 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.158537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCC CCGAGATACC CCGCCTGTCC TGGCCCCAGC GCCTGATCGT CACGGTCGTG
CTCGTGCTGC TGGCCGTATG GATCGGGTTG GCAGGCGCCG AGCGCCTCTC GGCCCGATTC
GACCCGGAAC CCGCGCGTGC CGTGCCGCCG CCGGCCGTGG AGACGCTTGT CGTCTCGGAG
GAGACGGCGG TTGTGGAGCG GGTCTATCGC GGTAGCGTGG AGTCCGAGGG GCGGGCGCGC
ATCTCGGCCC GGCTCACGGC CCAGATACTT CAGATCCCCC ATCGTGAAGG CGCCCTCGTG
CGCCGGGGGG ACGTGCTTGC CCGTCTGGAT GACGAGGAAA TCAGGCGCGA CGCGGCCCGT
CTCGAGGCCG TGGCCGACCG CCTGGAAGGC GAACGGGCCA CCGCCCGGCG TGAAGCCGCC
CGCCAGGAGG ATCTCTTCCG GCGCAACCTG ACACCGGAGC GAAGCCTCGA CGACGCCCGC
CAGCGGGTAA GCACCCTGGA GGCCCAGATC CGCGAGAACG CGGCGGCGCT GGGCCTGGTG
CAAAGGCGCC TGACCTACGC GGAGGAACGC GCCCCGTTCG ACGCGCAGGT GCAGCGCGTC
CACGCCAGCG AGGGCGAACT GGCCGCCGCG GGTCAGCCCC TGGTGGAACT GGTGGCACTC
AGCAGCCTCA AGGCGGTGGT GCAGGTGCCG CAGGTGGATG CCCGCCGTCT GCGCCCGGGG
ATGACCGTGC GCCTGGAGGT CCCGGCCCTG AGCCGGATCT GGCCCGCCCG GGTGGACCGC
GTCTACCCGG CCCTGGACGC CGGCAGCCGC AACGCGACTT TTGCCGCGTT CTTTCCCGAA
GACGCGGATG GGGTGCGCCC CGGCATGGCC GTGCAGGCCC ATATCGCGCT GGATCACATC
GAGGGGGCCG TGCGCCTCCC GGCCCAGGCG GTGCTCGGTG AGGGGCCGGA GCGCCGGGTG
TATGTGCTGG AGGACGGCCG CGCGCGGGAG CGCCTCGTGC AGGTGGCCGT GGCCCGCGCC
GGCGAGTACC TGATCACCGC CGGGCTCGAG GCGGGTGAGC AGGTCATCGT CACCGCCGAC
CCGCGCCTTG GCGACGGCCT GCCCGTGCAG GCCGGCGAGC ATCCCCACCG ATGA
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| Protein sequence | MSAPEIPRLS WPQRLIVTVV LVLLAVWIGL AGAERLSARF DPEPARAVPP PAVETLVVSE
ETAVVERVYR GSVESEGRAR ISARLTAQIL QIPHREGALV RRGDVLARLD DEEIRRDAAR
LEAVADRLEG ERATARREAA RQEDLFRRNL TPERSLDDAR QRVSTLEAQI RENAAALGLV
QRRLTYAEER APFDAQVQRV HASEGELAAA GQPLVELVAL SSLKAVVQVP QVDARRLRPG
MTVRLEVPAL SRIWPARVDR VYPALDAGSR NATFAAFFPE DADGVRPGMA VQAHIALDHI
EGAVRLPAQA VLGEGPERRV YVLEDGRARE RLVQVAVARA GEYLITAGLE AGEQVIVTAD
PRLGDGLPVQ AGEHPHR
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