| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0284 |
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| Symbol | |
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| ID | 7316260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 320647 |
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| End bp | 322716 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643615169 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_002512370 |
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| Protein GI | 220933471 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA ACTCAGACTC GGCATCCGGC GAGGTGCCGA CCCAGGAGCG GGTCGCGCAG
CTGCTCGGCC AGGCACCCCG CCTGATGGCC GAAGGGCGCG TGACTGAACT GGCCGAGGCC
CTGGCCGATT TGCCGAACGC CTTGCGTGCC CGTGAACCCT GGCTGGTCTA CTGGGACGCG
ACCACCCGCA TGTTCCAGTC ACCGGCCGCC GCCCGGGATG AATTTGCCCG CGCCTTCGAA
CAGTTCGAGG CGCGAGCCGA CATCCAGGGT CAGTACCTGG CCTGCACGGC CATCCTGGAA
TGCCTGGTGC TCGACTGGAC CGACTTCGAT CCCGCCGATC ACTGGCTGGA GCGCTTCGAG
ACCCTGCATC AGCGCCACCC GGACTTCCCG TCGCCGGAGA TCGAGATCCG CGCCAGCGCG
GCCATGCTCA GCGTCATGTC CTACCGGCGC CCCGGGCATG CGCGCATGGC CCACTGGGTG
GCCCAGTCCC ATGCCCTGAT CGACCGGCAC CGCAGCCCGC AGTGCCTGGC CGCCTTCGCC
TTCGGGCTGT TCTTCTACCA TCTCTGGGTG GGTGATACCC CGGCCCGCAA CCGCATCCTG
CATCAGGCCG GCCCCCTGGC GGACTCTGCG CAGATACCCG CCATCGTGCG CATCGGCGTG
CACGTGATGC GTGCCATCGA CCACATGTCC CGCGGACAGC TGGCAGAGGC CCAACACTGG
GCCGACCAGG GCATCCGTCT TGGCCAGGAA CACGGGGTGA AGCTGTGGGA TTTCCTGGTC
CATGCGCCGG CCATCTACGC CGCCCTCTCC GCCGGTGACC TGCCCGCCGC GGGCAGGCAT
CTCTCGGCCA TGGGCGCCAG CCTCAGCCTG CGCGGGCGCC TGGACCAGGC CTACTATCAG
CACATCGCCG CCCTGGTCGA ACTGCACCGG GGAAACCTGC CTGTGGCCCG GGAGATCGCC
CGACAGGGCC TCGAGGCCAG CGACCAGGCG GGCGTGCCCT TCGGTGCCGC CTACAACCAC
CTCAGTGCCG CCCTGGTCGC CCACGGCCTG GGCGATGCCA GCGCCGCCGA AGACCAGCTC
GCCCGCATCG ACACCATCGC ACGGGAGACC AGCAGCCGCT GGTTCGATTA CCTGGCCCGG
TTCAATCCCG TACGCCTGGG CACAAGCGTG GATGGGGACC TTCAGGCACT GGCCGAGGCC
CTGGCCCTGG GCCGGTCCCT GGAGAGCTAC TCGGCCCCGT TTCTGCGGCG CGAGGAACTG
GCCGCCCTCC TTGCCCGGGC CCTGGAGGCG GACATCGAGC GTGACTATTG CCGGGAGGTC
ATCTGCCGAC TGCAGCTTGC CCCGCCGGTC GGTCGCGAGG TGCCCGCCAG CTGGCCCTAC
CCGGTGAAGA TCCGCACCCT GGGCGGTTTC GGGGTGAAGC TCGAGAGCGC TTCGCCGGGC
ACCGGCAACC GGCAGCGCCC CCTGGAACTG CTCCAGGCCA TCATCGCCCT GGGCACCCGC
AAGGTCCCCG TGGCGCAGCT GTGCGATGCC CTGTGGCCGG ACCTGGAGGG AGACCTGGCG
CGCCAGAACC TCAAGACCAC GCTGCACCGG CTGCGCAAGC ACCTGGGACG GGATGACAGC
CTGCTGTGGC GGGAAGGCTG CATCAGCATC AACGAGGACG CGGTGCTCGT TGACGCACTG
CGTTTCGAGC AGGCCCTGAC TGCGGCGCTG GCCGCGGAGA ACGATGCGCA GCTTCGCGAG
GCCCTGCAGC TCTACCGGGG CCCATTCCTG CCCGGGGAAA ACAATGCCCA CTGGGCCCTG
TCCGCCCGGC TCAGGCTGCG CAATCTTTAC CTCAAGGGCG TGCGCAGGCT GCTCGATCAC
GATCTCGGCG CCGGCGATCA CGAGGCCTTC CTGCACCTGG CGGAACAGGC CGTGGCGCTG
GAGCCCCTGG CCGAGGACAT CCAGTCCGCG CTGATCCAGG CCTACCTGCA CAGCGGCCGC
AAGGGCGATG CCCGCCTGGC CTATGAGCGA TGCCGGGCCG AGTTCATGGC ACGGCTGGGC
GAGATGCCCG CCTCCATATC CGAACCGTGA
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| Protein sequence | MAKNSDSASG EVPTQERVAQ LLGQAPRLMA EGRVTELAEA LADLPNALRA REPWLVYWDA
TTRMFQSPAA ARDEFARAFE QFEARADIQG QYLACTAILE CLVLDWTDFD PADHWLERFE
TLHQRHPDFP SPEIEIRASA AMLSVMSYRR PGHARMAHWV AQSHALIDRH RSPQCLAAFA
FGLFFYHLWV GDTPARNRIL HQAGPLADSA QIPAIVRIGV HVMRAIDHMS RGQLAEAQHW
ADQGIRLGQE HGVKLWDFLV HAPAIYAALS AGDLPAAGRH LSAMGASLSL RGRLDQAYYQ
HIAALVELHR GNLPVAREIA RQGLEASDQA GVPFGAAYNH LSAALVAHGL GDASAAEDQL
ARIDTIARET SSRWFDYLAR FNPVRLGTSV DGDLQALAEA LALGRSLESY SAPFLRREEL
AALLARALEA DIERDYCREV ICRLQLAPPV GREVPASWPY PVKIRTLGGF GVKLESASPG
TGNRQRPLEL LQAIIALGTR KVPVAQLCDA LWPDLEGDLA RQNLKTTLHR LRKHLGRDDS
LLWREGCISI NEDAVLVDAL RFEQALTAAL AAENDAQLRE ALQLYRGPFL PGENNAHWAL
SARLRLRNLY LKGVRRLLDH DLGAGDHEAF LHLAEQAVAL EPLAEDIQSA LIQAYLHSGR
KGDARLAYER CRAEFMARLG EMPASISEP
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