Gene Hore_19310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_19310 
Symbol 
ID7312746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2067760 
End bp2068995 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content45% 
IMG OID643612377 
Productsmall GTP-binding protein 
Protein accessionYP_002509673 
Protein GI220932765 
COG category[R] General function prediction only 
COG ID[COG1160] Predicted GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00194835 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGA CACCCAGGGC CAATCGTCCT CATATAGCAG TCTTCGGCCG CCGTAATGTG 
GGGAAATCAA CCCTGATTAA TACCCTGACC AATCAGGAAC TGGCTTTAGT ATCTGATGTG
CCGGGAACAA CAACTGACCC GGTTTATAAA TCTATGGAGT TACTGCCCCT GGGCCCCGTT
GTTATGATAG ATACAGCCGG GATTGATGAT GTCGGTTCCC TGGGGAAATT AAGGATAAAA
AAAACCAGGG AAGTTATCAG GAGAACTGAC CTGGCCATTC TGGTTATAGA TCCGTTCCAT
GGAGCAGGCA ATTACGAGAA GGATTTATAT AATAAATTGC AGGATAATAA TATTCCGGTT
GTAGTAGTCA TAAATAAGAT TGACCGGGTG AAGGGTATAA AACAGGATTT ATTAGATAAG
GTAAAGTTAT TATTCGGTGT AACCCCCATT AAGGTCAGTG CCCACTCAGG GACAGGAATA
GAAGAACTCC GGGAGGTCCT TGTAAACAGG GTTCCCAGAG ACCATGAACA GCCCCATATT
ATCGGTGATT TGATAGATGA AGGTGATACC GTAATCCTGG TTACCCCTAT TGACAGTGCT
GCTCCGAAGG GAAGGTTAAT CCTGCCCCAG GTCCAGACCC TGAGGGATAT TCTCGATAAT
CATGGGATGG GCCTGGTTGT TAAAGAAACA GAGTTAGAGG GGGCTTTAAA AACACTCAGG
GAAAAACCTA GATTGGTGGT TACCGATTCC CAGGTCTTTG GCCTGGTAAG TAAGATTGTG
CCTGAAGACA TCTATTTAAC CGGTTTTTCT ATTCTCTTTG CCCGTTATAA AGGGGATTTA
ATGAAATATC TGGAAGGGGT TGCGAAACTG GAGAATCTCA GGCCCGGGGA TAAGATTCTA
ATAGCAGAGG CCTGTACCCA TCGCCGTCAG CCAGATGACA TCGGAACTGT TAAACTTCCG
GGATGGATCA GGTCAAGGAT TTGTAATGAG GTTAAATTTG ACCTTGTTTC GGGACGGGAA
TATCCCGATA ACCTCGAACA GTATGATCTG GTATTACACT GTGCGGGATG TATGCTCAAT
AGAAAAGAGG TTTTATCCAG GTTGAAAGAA GCAAATACAT CTGGGGTACC TGTTGTAAAC
TATGGTATGG CTATTGCTTA TCTCCATGGT ATTCTGGACA GGGCTTTAAA ACCTTTTGGT
GAAGCCTATC AGACGTGGAA GGGTTATAGA AAGTGA
 
Protein sequence
MQQTPRANRP HIAVFGRRNV GKSTLINTLT NQELALVSDV PGTTTDPVYK SMELLPLGPV 
VMIDTAGIDD VGSLGKLRIK KTREVIRRTD LAILVIDPFH GAGNYEKDLY NKLQDNNIPV
VVVINKIDRV KGIKQDLLDK VKLLFGVTPI KVSAHSGTGI EELREVLVNR VPRDHEQPHI
IGDLIDEGDT VILVTPIDSA APKGRLILPQ VQTLRDILDN HGMGLVVKET ELEGALKTLR
EKPRLVVTDS QVFGLVSKIV PEDIYLTGFS ILFARYKGDL MKYLEGVAKL ENLRPGDKIL
IAEACTHRRQ PDDIGTVKLP GWIRSRICNE VKFDLVSGRE YPDNLEQYDL VLHCAGCMLN
RKEVLSRLKE ANTSGVPVVN YGMAIAYLHG ILDRALKPFG EAYQTWKGYR K