Gene Hore_18170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_18170 
Symbol 
ID7313815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1938787 
End bp1939923 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content38% 
IMG OID643612264 
Producthypothetical protein 
Protein accessionYP_002509561 
Protein GI220932653 
COG category[S] Function unknown 
COG ID[COG4254] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000000581203 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAT TAACTGTATT ATTTGTAATT ATAGTAATGA TAACAACAGT CTTTATTACA 
GGAAATGCTT CACCGGCCTG TACAGAGACA GAACCGGTGG CTACAGTCAG TAATGTAGAG
GGCAGGGTTG AGAAACTGGT TAATAACTGG TTTTTAAATA TTTTTCAGAT AAAGGCCTGG
CATGTTATTA AAAATGGAGA TAACCTAAAT CAGGGTGATG TTATTAAAAC CGGTGAAAAG
GCTTCCTGTG AAATTGTTTT CAGGAATAAT TCTTTTGTCA AAATAGATGG CGGAAGTGAG
GTTGTCATAG GAGAATGCAA TATAGTTGAG ACCGGGACAA CGACTTCCCT TAAACTTAAT
AAAGGTAGAA TATGGTCCAG GGTTGAAAAA GTATGGAAGG GTATAACTAA ATTTAAGGTT
ATAACCCCTT CAGCAGTGGC CGGGGTTAAA GGAACCCTCT TCTCAGTTTG TGTTGGTGAA
GGTGATACCA CCATTCTTTC GGTAAGAGAA GGGGCTGTTG AGCTGTCCAG TAGGGAAGGT
GATGAACGGG TTCTTGTTAC CACTAATAAC ATGGCCCGGG CCAGGGCCGG CCTGGTTTTA
AAGCCTGTCA AAATAGATGA ACAGGAGAAA AGGGCCTGGG AGAGGTCAGA TGTTAAGGAA
TGGATTAAAA GAGTCAACCT CAAAGTGGGT GAAGGTAGTA AGGCAGATGA TGGCACAAGT
CATGTCCCTG AAGAACCTGC CGCTAATAAC GGGAAACCCG ATGACATGGA CCTACCTCCC
GATAAAGATA AAGATGATGA GATAGATGAT TACTCTGATA AAGAAGACAA GGATGATAAC
ACGAATAATA TAGATGATGA TAACTATAGT AAGGATAAAG ATGAAATCAT TAAAGACAAA
GATAAAAAAG AAGATGATCA GGACCAGGAT AAAGATGCAG ATGTAAAAGA AAAACCCACA
GATATAGAAA ACGAAGATAA AGATAAAGAT GAAAAAAAAG AAGATAAAGA TAATGGTGAA
GAAAATGAAG ACAGAAATGA AAAAGATTCA GATGAGGAAG TTAATAGTTC CAGTAAAGAT
AAGAATACAA ATAAATCAAA TCCAGGAGTT CTGGCAAAAA CCTCAAAGAA AAAATGA
 
Protein sequence
MRRLTVLFVI IVMITTVFIT GNASPACTET EPVATVSNVE GRVEKLVNNW FLNIFQIKAW 
HVIKNGDNLN QGDVIKTGEK ASCEIVFRNN SFVKIDGGSE VVIGECNIVE TGTTTSLKLN
KGRIWSRVEK VWKGITKFKV ITPSAVAGVK GTLFSVCVGE GDTTILSVRE GAVELSSREG
DERVLVTTNN MARARAGLVL KPVKIDEQEK RAWERSDVKE WIKRVNLKVG EGSKADDGTS
HVPEEPAANN GKPDDMDLPP DKDKDDEIDD YSDKEDKDDN TNNIDDDNYS KDKDEIIKDK
DKKEDDQDQD KDADVKEKPT DIENEDKDKD EKKEDKDNGE ENEDRNEKDS DEEVNSSSKD
KNTNKSNPGV LAKTSKKK