| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_16890 |
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| Symbol | |
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| ID | 7313207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1809171 |
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| End bp | 1810730 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643612136 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_002509433 |
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| Protein GI | 220932525 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 67 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTACCT GGTTTCAAGA CTACATAGAA CAATTTAAAG AATTATGGTC CAATTTAAAT
AAACGGGCAA AGGTTGTTAT CATATCAGGG GTGGGAGTGG ATTTGCTAAC CCTGATTTTA
ATAATAGCTA TGGGGAGCAG CCCTGATTAT CAACCTTTGT TTAGTAATTT AAACCCCAGA
GATGCTGATG CCATTATTGA GAAGCTGGAT GAACAGGGGA TTCCCTACCG GTTAACAGAT
AATGGCCAGA CAATCCTGGT TCCTTCTCAG CATGTTTACA AAACCAGGCT TGATATGGCT
GGAGAAGGTT TACCATCCCA GGGTGTTGTT GGATTTGAAA TCTTTAACCA GAGCAACTTC
GGGACAACAG ATTTTGAAAG AAAGGTAAAT TTTTATAGAG CTCTGGGTGG GGAATTGAGC
CGTTCAATTC AGGCCATGGA GGCCATTGAG TATGCCAAGG TTCAGATTAC GGCTCCCAAA
GAAAGCCTTT TCATTGAGGA GGAGCAACCT GCCGAGGCTT CTGTTTTATT AAAATTTGTT
CCCGGGCACA AATTGAGCCC GGACCAGGTC AAGGCTATAT CTAACCTGGT TGCCAGCAGT
GTTCAGGGAC TGGATCCCGA TAAGGTTACC ATTGTCGATA CCTCAGGTAA CCTTCTTTCC
CGGAATACTG ATAAAGATTT TTATAATAGT CAGCTTACCA TGAACCAGTT TGAGATTCAG
CGTAAATTTG CTGAATCTCT GGAAAATGAC CTCAGGGCCT TTCTGTTTAA GGTACTGGGC
CCTGATAATT TTACGGTTCA GGTCAAGGCC TGGTTAAATT TTGATAAACG ACAGGTTGAG
AGCAAGACCT ATTCACCGGT TGTTGGTGAT GAGGGAATTG TTCGCAGCCA GCAGGAACAT
GAGGAAAGTT ATGAGGGTGA AAACCCTGTA GCCACAGGAG TTCCAGGGAC AACTTCTAAT
ATTCCCCAGT ACCAGTCAGT TGAAGAAGAA AACAGCGGGG GAACCTATGA AAGCTCTGAT
GTTATTACCA ATTATGAAAT AAATGAAAAG ATAGAAAAGC ATGTCTATTC CCCTGGTAGT
GTGGAAAGGC TTTCAGTAGC TGTTATAGTA AATAGTTCCC TGGAAAGAGA TGAGCTTCAA
AAGATCAGGA ACGCTGTTCA GGCGGCTATT GGATATGACC CTGAACGCGG TGATATGGTA
ACTGTGACCA GTATGGACTT CGATGAGACG CTTAAACAGC AGGTGGCACA GGCCCAGTCC
TCGGCCCTGC AGGCCCAGAA AACAAGGATG TACATATATG GTGGTCTCAT AGTTTTAATA
CTTATTATAT TGTCAATTCT CCTTCTTTCC TTTAAGCGTT CTAAAGAAAG TGAGGAAGAT
ATGGTTGGTA AAGCCATCGA CTATATGGTT GGGGAAGAGG CTGAAGAAGA AATGGCTGCT
ACAGAGTTAA CTGAAGAAGA AAAGAAACGT CAGAAGATGA AGACTGAGAT CGCTGAACTT
GTTAATGAGA AACCTGATGA GGTTGCCCAG ATACTTAAGA GCTGGTTATT AGAGGATTAA
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| Protein sequence | MGTWFQDYIE QFKELWSNLN KRAKVVIISG VGVDLLTLIL IIAMGSSPDY QPLFSNLNPR
DADAIIEKLD EQGIPYRLTD NGQTILVPSQ HVYKTRLDMA GEGLPSQGVV GFEIFNQSNF
GTTDFERKVN FYRALGGELS RSIQAMEAIE YAKVQITAPK ESLFIEEEQP AEASVLLKFV
PGHKLSPDQV KAISNLVASS VQGLDPDKVT IVDTSGNLLS RNTDKDFYNS QLTMNQFEIQ
RKFAESLEND LRAFLFKVLG PDNFTVQVKA WLNFDKRQVE SKTYSPVVGD EGIVRSQQEH
EESYEGENPV ATGVPGTTSN IPQYQSVEEE NSGGTYESSD VITNYEINEK IEKHVYSPGS
VERLSVAVIV NSSLERDELQ KIRNAVQAAI GYDPERGDMV TVTSMDFDET LKQQVAQAQS
SALQAQKTRM YIYGGLIVLI LIILSILLLS FKRSKESEED MVGKAIDYMV GEEAEEEMAA
TELTEEEKKR QKMKTEIAEL VNEKPDEVAQ ILKSWLLED
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