Gene Hore_16820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16820 
Symbol 
ID7313200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1802940 
End bp1803368 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content38% 
IMG OID643612130 
Productflagellar hook capping protein 
Protein accessionYP_002509427 
Protein GI220932519 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.274854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATGC TGGCCAGAAC CTTTAGTGTT ACTCCACAGA CCAGCCAGAG TAATGAAAAA 
GTCACTATGG AAAGAAATGA TGGCAATAAC CTTGATAAAG ATGCTTTTTT CAAACTATTA
ATTACCCAGT TAAGGCACCA GGATCCCTTG AAACCAATGG AAGATAGAGA GTTTATTGCC
CAGATGGCTG AATTTAGTTC CTTAGAACAG ATGGCCAATA TGAATGAAAA CTTAAGTACC
TTTATGCGAA TGGAAAGTCT GTCCCAGGGG GCAGCTTTGA TTGGTAGAAA CGTTGAGTAT
GTAGATAGTC AAAGTGGAAG GATTTTAAGT GGTAAAGTGA CCAAGGTAGT TTATGAATCG
GGAACCCTGT ATGCCCATCT CGATAATGAT GTAAAAATAC CTGTAGATAC TATTACTTCA
ATCAGTTAA
 
Protein sequence
MTMLARTFSV TPQTSQSNEK VTMERNDGNN LDKDAFFKLL ITQLRHQDPL KPMEDREFIA 
QMAEFSSLEQ MANMNENLST FMRMESLSQG AALIGRNVEY VDSQSGRILS GKVTKVVYES
GTLYAHLDND VKIPVDTITS IS