Gene Hore_16300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16300 
Symbol 
ID7312666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1751909 
End bp1753411 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content48% 
IMG OID643612077 
ProductGlutamate synthase (NADPH) 
Protein accessionYP_002509374 
Protein GI220932466 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0221938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAA GCCATCGCAA TCCAGAGTTT ATTATTGAAA GGGATTATGA AAAGTGTATA 
AACTGCCGCC TCTGTGAACG ACAGTGTGCC TATGAAGTCC ATTATTATGA TGAAGACCAG
GATAAAATGA TGGCCCGTAA CCGTAACTGT GTTAACTGTC ACCGCTGTGT AAGTTTATGT
CCCACTGATG CCCTTGGAAT CAAAAAATAT CCCCTTCAGT TCCGGGAGAA TTATAACTGG
ACTTCCGAAA TGATAAATAA TATTTATAAA CAGGCTGAAA CAGGTGGGGT CCTTCTTAGC
GGTATGGGGA GTCCGGCCCC TAAGAAAATA TACTGGGACC ACATTCTATT AAACGCAAGC
CAGGTTACAA ATCCTTCCAT AGATCCCTTA AGAGAACCGA TGGAATTAAA AACTTTCCTG
GGACGTAAAC CTGATAAACT TACCATTACC GGGGAAGGTG AGCTGGAAAA GTTACCTCCC
CAGTTAGAAC TTGAAACCCC GATTATGTTT TCAGCCATGT CTTTTGGTTC TATCAGTTTA
AATGCCTGTA AATCTCTTGC CAGGGCGGCT TCTGAACTGG GCATTATGTA TAATACCGGT
GAAGGGGGGC TTCACCGGGA ACTGTATCAG TATGGTAATA ATACTATAGT GCAGGTGGCT
TCGGGGCGGT TTGGGGTCCA TAAGGAGTAT CTCGAGGCCG GAGCTGCTAT AGAAATAAAG
ATAGGCCAGG GAGCCAAGCC GGGAATTGGT GGACACCTTC CCGGGGAAAA GGTGGGGGAT
GAGGTATCCA GAACCAGGAT GATTCCCCCG GGTACAGATG CCCTGTCTCC TGCTCCCCAT
CATGATATCT ATTCTATTGA AGACCTACGC CAGCTGATTT ACGCCCTGAA GGAAGCGACT
GATTATAAAA AGCCAGTTTC GGTCAAGATT TCAGCTGTGC ATAATGTTGC GGCTATTGCA
TCCGGTCTTG CCACTGCTGG AGCTGATATT ATTGCTATAG ATGGTTTCCG GGGGGGAACC
GGGGCCGCTC CTACCATGAT CAGGGATAAT GTCGGTATTC CCGTAGAGCT GGCCCTGGCA
GCGGTCGATA CCCGCTTGCG GCAGGAGGGT TTGCGTAATC GGGTTTCCCT GGTGGTCGGG
GGGAGTATAA GAAACAGTGC CGATGTAGTT AAAGCAATTG CTCTGGGGGC TGACGCTGTT
TATATCGGTT CAGCTGCCCT GATAGCCCTG GGATGCCATA TGTGTCAGAA GTGTTATACA
GGTAAATGCA ACTGGGGGAT AGCAACCCAG CGTCTGGACC TTGTCAACAG GTTGAACCCG
GAAAAAGGGG TTGAAAGGGT TAAAAACCTG ATCAGGGCCT GGTCCCATGA AATAAAAGAG
ATGCTCGGTG GTATGGGTAT CAATGCTATT GAAAGCCTCA GGGGAAACAG GCTCATGTTG
CGGGGAATGG GGTTGAATAG TGAAGAACTT AAAATTCTGG GAATCAAACA TGCCGGACAG
TAG
 
Protein sequence
MSSSHRNPEF IIERDYEKCI NCRLCERQCA YEVHYYDEDQ DKMMARNRNC VNCHRCVSLC 
PTDALGIKKY PLQFRENYNW TSEMINNIYK QAETGGVLLS GMGSPAPKKI YWDHILLNAS
QVTNPSIDPL REPMELKTFL GRKPDKLTIT GEGELEKLPP QLELETPIMF SAMSFGSISL
NACKSLARAA SELGIMYNTG EGGLHRELYQ YGNNTIVQVA SGRFGVHKEY LEAGAAIEIK
IGQGAKPGIG GHLPGEKVGD EVSRTRMIPP GTDALSPAPH HDIYSIEDLR QLIYALKEAT
DYKKPVSVKI SAVHNVAAIA SGLATAGADI IAIDGFRGGT GAAPTMIRDN VGIPVELALA
AVDTRLRQEG LRNRVSLVVG GSIRNSADVV KAIALGADAV YIGSAALIAL GCHMCQKCYT
GKCNWGIATQ RLDLVNRLNP EKGVERVKNL IRAWSHEIKE MLGGMGINAI ESLRGNRLML
RGMGLNSEEL KILGIKHAGQ