Gene Hore_16250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16250 
Symbol 
ID7312661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1746866 
End bp1747288 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content40% 
IMG OID643612072 
ProductNLP/P60 protein 
Protein accessionYP_002509369 
Protein GI220932461 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATATAG AGATTAAAAA AATAGTTAAC AGGTTAATTG GGATTCCATA TAAGCATAAC 
GGGAGATCCT ATCAGGGGGT TGACTGCTGG GGCCTTGTCT ATTTATTTTT TAAAGAACTC
GGGGTAGATT TGCCTGTTGG TGACGGTGAG TTTGTGCCTG ATGACTGGTA TAAACAGGAA
CCAGATCGTT ACATCAGGGG AATAAGGACC CTGGGAGAGG AAGTAGGGCA TTATAGATAC
TTAAAACCCC TGGATATTCC CTATTTTAAA CTATATAGAA ATGTAATCAC CCACTCCGGG
GTAATGGTAG ATGATGATAG CTTTATCCAT GTTTTGATCA ATAAAGAGGT AAGGCTTGAT
AGTATGAGCC GGAAGTACTG GAAGAGAAAA TATGCAGGAG CTATCCGATT AACAGGTCTA
TAA
 
Protein sequence
MDIEIKKIVN RLIGIPYKHN GRSYQGVDCW GLVYLFFKEL GVDLPVGDGE FVPDDWYKQE 
PDRYIRGIRT LGEEVGHYRY LKPLDIPYFK LYRNVITHSG VMVDDDSFIH VLINKEVRLD
SMSRKYWKRK YAGAIRLTGL