| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_16160 |
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| Symbol | |
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| ID | 7312652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1731866 |
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| End bp | 1733614 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643612063 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002509360 |
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| Protein GI | 220932452 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.135656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGAG CTGCTATATA TCATGTATGT GGAGGCAGTT ATGCCTTTCC CGTTAATAAA
AATACACTGC GGATCAGGTT GCGGGCTGCA CGAAATGACC TTGACAGGGT TGTAGTTGTA
TATGGAACAA GATACCCCGG AGATGGAGAA GATCCATACT TAAGTCAGGA GATGGAACTG
GTGGCTTGTG ATGAGCTTCA CGATTATTAT GAAGCCGATA TTAGACTTGA TGATGCCAGA
TTCAGGTACC ATTTTTACCT GGAAGACGTT CAGGAAAGCC TGTGGTTAAA TGAAAAGGGT
TTTTTTGAGG AAAGGCCCAG GGGTTTCTTC TCTGGGTTTT TCCAGTACCC TTTAATTAAT
TATGCCGATA TTTTCAGTAC TCCGGACTGG GTAAAAGATG CTGTTTTTTA TCACATATTT
CCGGAAAGGT TTTATAACGG GGATCCATCC AATGACCCCC GTGGAGTTTC CCCCTGGGGT
GGGAAACCCG GTAGAAAATC ATTTTTTGGT GGTGATTTAG AGGGGATTAT TAAAAAACTC
GATTACATAG AAAGCCTCGG GGTAAAGGCC ATTTACCTTA CACCTGTGTT TAAATCACCC
AGTAACCATA AGTATAATAT TGATGACTAT TTCCAGATAG ACCCCCATTT TGGAGACCTT
GAAACAGCAA GAAGGATGGT CATAGAAGCC CACAGGCGTG GAATTAAAAT TATTTTTGAT
GCGGTATTTA ACCATTGTGG TTATGATTTC TTTGCTTTCA AGGATGTTCG TCAAAAGGGG
GAGAAGTCAC AGTATAAAGA CTGGTTTGAA ATTGAAAGCT TTCCTGTGCA GACGGATCCC
ACAAATTATA GAACCTTTGC CAATAATATT GCCCGGATGC CCAAGTTAAT GACCGGAAAT
CCTGAGGTCA GGGAATATTT GATTAACGTG GCAACTTACT GGATTAAAGA ACTTGATATT
GATGGATGGC GGCTGGATGT TGCTGATGAG GTCGACCATC ATTTCTGGCG GGAGATGCGT
AAAGCTGTTA AGGAAATTAA AGAGGATGCC TACATTGTTG GAGAAGTATG GCATAATTCT
GAAGACTGGC TTCAGGGTGA TCAATTTGAT GCTATTATGA ATTATCCCTT TACCTATGCT
GTAATTGACT TTTTTGCCCG GAACAGAATT GATGCGGGCA CTTTTGATGC CCAGCTGGCT
AAAAACAGGA TGTTATATCA GGATAGTGTT AATTATGTAA TGTTGAATCT TCTTGATAGT
CATGATACCC CCAGGGCCCT TCATTTTTTT GAAGGAAACA AGGAAAAATT CAAACTGGCT
GTTTTGTTCC AGATGACATA CCTTGGGGCC CCCATGGTCT ATTACGGTGA TGAACTCGGT
ATGACCGGGG GTGAAGAACC GGCATCACGT GGTTGCATGG TCTGGGATAA AGAAAATCAG
GATCAAAACT TATTAGATTA TTATAAAAAA CTGATATCAA TAAGGAATAA GCTAACCCCT
TTACTCCGGG GTAATTATAA AACAATTTTA GTAGACAATA TCAGAAATAT TTATGGATTT
ACACGACATT ACAGGGGGCA GTCAGTTATG GTCATTATTA ATAATAGTCC CCGGCCACAG
CAGGTTAAAA TTAAAAAGTT TAAAAACAGA GGAACTATTA CAGACCATCT GAGTGGACAG
ACATACAATA CCACAGATGG TTATTACCTC CTTGACTTAT TACCATATCA GGGATTAATC
CTGGAATAA
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| Protein sequence | MNRAAIYHVC GGSYAFPVNK NTLRIRLRAA RNDLDRVVVV YGTRYPGDGE DPYLSQEMEL
VACDELHDYY EADIRLDDAR FRYHFYLEDV QESLWLNEKG FFEERPRGFF SGFFQYPLIN
YADIFSTPDW VKDAVFYHIF PERFYNGDPS NDPRGVSPWG GKPGRKSFFG GDLEGIIKKL
DYIESLGVKA IYLTPVFKSP SNHKYNIDDY FQIDPHFGDL ETARRMVIEA HRRGIKIIFD
AVFNHCGYDF FAFKDVRQKG EKSQYKDWFE IESFPVQTDP TNYRTFANNI ARMPKLMTGN
PEVREYLINV ATYWIKELDI DGWRLDVADE VDHHFWREMR KAVKEIKEDA YIVGEVWHNS
EDWLQGDQFD AIMNYPFTYA VIDFFARNRI DAGTFDAQLA KNRMLYQDSV NYVMLNLLDS
HDTPRALHFF EGNKEKFKLA VLFQMTYLGA PMVYYGDELG MTGGEEPASR GCMVWDKENQ
DQNLLDYYKK LISIRNKLTP LLRGNYKTIL VDNIRNIYGF TRHYRGQSVM VIINNSPRPQ
QVKIKKFKNR GTITDHLSGQ TYNTTDGYYL LDLLPYQGLI LE
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