Gene Hore_15200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15200 
Symbol 
ID7313113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1624794 
End bp1625084 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content35% 
IMG OID643611962 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_002509264 
Protein GI220932356 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGTTT GGTTTATTTA TGATATTGTT GAAGATAAGC CACGCAAGAA AATAGCAGAT 
AAGGCCATTG AACAGGGTTT ATACAGGGTA CAAAAATCGG TATTCCTGGG GGATATTGAA
CCTAATCTTC TGGATGAACT ACTGGTATAT GCAGAAGAGT TGATTGACCC TGAAAATGAC
TCTGTCTATG CCTTCCCAAT GTGTCAGGAA GATTTTAAAA AAGTAGAAAT TATTGGACAG
GCTTTTGATA AAGCCATGGT TAATGATAAA TTGAATAGTT TTTTTATGTA G
 
Protein sequence
MLVWFIYDIV EDKPRKKIAD KAIEQGLYRV QKSVFLGDIE PNLLDELLVY AEELIDPEND 
SVYAFPMCQE DFKKVEIIGQ AFDKAMVNDK LNSFFM