| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_12660 |
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| Symbol | |
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| ID | 7313587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1358610 |
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| End bp | 1359767 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643611706 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_002509011 |
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| Protein GI | 220932103 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGGT CTATCAGGAT TAATGTTTTA GTATTAATTT TTTTGTTAAT CACCACTGGG
GTGCTGCTGG CAGATGAAAG TCAACCCCGG GTTACAATTG TGTTTTATGA GACACCATTA
CGGGAAGCCC TCAATGAAAT TTCACTGCAA ACGGGAGTAA ATATTATACC TGATTATACA
GTAGAGGGTG TTGTTACGGC AGATTTAAAT AATGTTCCCC TGGAAAAGGC TCTGGAAATA
ATATTATCTG GTGGGGGTTA TACCTTTTAC CATAAGGATA ACTATTATCT GGTTGGACTG
GCTGACCCCG GGAGTCGGAA TTTTGGTGAC CTGATCAATA CCAGGATTGT TGACCTGGAG
AATGTATCTG TCAGCACAGT ATTATCAATA CTTCCTCCCC ACCTTAAAGA TTATGTTTAT
GGAAACCATA AAGGAGACAT GTTATCTATT TCTGCACCGC CGACAAAGAT GGAAAAAATA
ATTAATCTTA TTAAGAGGAT TGATAAACCT AGAAAACAGA TTAAAATTAC AGTAGTAGTC
AGTGAAGTTT CAACAAAAGA ACTCAAAAAA CTGGGGACAG GTTTTCTTGA ATATCGGGAA
AAGGATAATC CATCTTTAAA CTTAAAATAT GATGGGTCAT CACTGGTTTT AAATGGTAAT
ATATTCGAAA ATTTGTTGAC CAGACTTGAA ATTTTACAGG AAGAGGAAAA GGCTAAAATA
CATGCTGACC CCAGTATTGT CGTCATGGAT GGAGAGCCAG CGGAGTTATT CATTGGAGAA
AAACAGACCT TATTTATTAC AGAGGATGAG GAAATAGAGT ACTTTAAAGA TATTAAAGTG
GGTATTTCTT TAAAAGTAAC CCCCAGGTTA ATTTCTAAAG ATGAAATGAT ACTTGATTTC
TCACCTTCAA TAAGCCATTT CGTAAATTCT AAATTACCTG AAATAGCAGT TAGAGAAAAC
ACACTTGATA CTACAGTCAG GGTAGCAAGT GGTCAGACAG CGGTTATAGC CGGTATGACT
TTACAGGATG ATTATAATTA TAAAAAGTCT GTACCTGGAT TAAATAAAAT TCCTTTATTA
AGATGGCTTT TTACCAAAAA AGTAAATGAT ACCGGAGATA GAGAATTATT AATATTTGTG
ACTCCAACAA TTAAGTAG
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| Protein sequence | MDRSIRINVL VLIFLLITTG VLLADESQPR VTIVFYETPL REALNEISLQ TGVNIIPDYT
VEGVVTADLN NVPLEKALEI ILSGGGYTFY HKDNYYLVGL ADPGSRNFGD LINTRIVDLE
NVSVSTVLSI LPPHLKDYVY GNHKGDMLSI SAPPTKMEKI INLIKRIDKP RKQIKITVVV
SEVSTKELKK LGTGFLEYRE KDNPSLNLKY DGSSLVLNGN IFENLLTRLE ILQEEEKAKI
HADPSIVVMD GEPAELFIGE KQTLFITEDE EIEYFKDIKV GISLKVTPRL ISKDEMILDF
SPSISHFVNS KLPEIAVREN TLDTTVRVAS GQTAVIAGMT LQDDYNYKKS VPGLNKIPLL
RWLFTKKVND TGDRELLIFV TPTIK
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