Gene Hore_11810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11810 
Symbol 
ID7313879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1277571 
End bp1278221 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content39% 
IMG OID643611617 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002508926 
Protein GI220932018 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTTTT CCCAGATCAG TAATTTCATA TCTCTTGGAG GACCGATGAC TATTCCCCTT 
ATTATTGCAT CTATTTTCGG GGTTGCCGTA ATTTTAGAAA AATTGATTTT TTTTGCCAGA 
TACCGTGATA ATAGCTTCAG GCTGATTAAA AAAATTGAAT TGCTTGTCGA AGAAGGTGAC 
ATTTTAACAG CCTTAAATGA ATTGAAAGGA GAACGGGGGC CAAATGCCAA ATTATTGTCA 
ACCGCCCTTG CCCACCATAG TGAAGAACCT GGCCGTATTA AAGAAGTCCT CCAGGCGGTA 
GGTGAAGATG AAATTAAAAA AATGGAAAAG CACTTACCGA TACTTGATGT GATAGCTACA 
GTTTCCCCCT TACTGGGACT ACTTGGAACT GTAATGGGTA TTATCAGTAG TTTTAATATT 
ATGGGAGCTG CTGCCGGTGC AGCTAACCCT CATCAGATCA GTGCCGGTAT TGCTGAAGCC 
TTAATTAGTA CAGCCCTGGG ACTTATAATA GCTATTCCTA CTGCTGTTTT CTATTCTTAC 
TTTGCCAATA AGGTTGAAAA TAAGGCCCAT GAAATGAATT TAAGTATGAT CGATATTTTA 
GAGGTGGTTG GAAATAACAG GAGGGAAGAT AATGTTAAAA ACTTCTCTTA A
 
Protein sequence
MNFSQISNFI SLGGPMTIPL IIASIFGVAV ILEKLIFFAR YRDNSFRLIK KIELLVEEGD 
ILTALNELKG ERGPNAKLLS TALAHHSEEP GRIKEVLQAV GEDEIKKMEK HLPILDVIAT 
VSPLLGLLGT VMGIISSFNI MGAAAGAANP HQISAGIAEA LISTALGLII AIPTAVFYSY 
FANKVENKAH EMNLSMIDIL EVVGNNRRED NVKNFS