Gene Hore_11220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11220 
Symbol 
ID7312867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1215432 
End bp1216508 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content29% 
IMG OID643611560 
Productregulatory protein ArsR 
Protein accessionYP_002508869 
Protein GI220931961 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.700894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGATAA ATACATCCAA CATTATACTT CATACTAATT CAAGTTACGA ATTACTGATA 
AGCTTAATCA GATTGGCCAA AAATGATGAA TTACAAAAAC TAATCCGGGA ATTTAATTTA
AATAGTAAAA AAGAAATACA TGACTGGGTT AAAAACACCC TTAATTCATT TAATGATAAC
GAAAAGGAGT TATTAAATTA TTACTTTGGA ACTGAATGTT TATTTTCCCT GGGGTTAATT
GAATATATAA ATTCAATTGA GTTCAGGGAA AACGATCTTA ATATAGATAG ATTTATAAAT
GGTTTAAAAA GTCTGGAGTT AAACCACTTT TTATACTATT TACTGAAATC AAATTATGTC
GGTCAAAAAC CATTATCCCC CGGGTTTATA AATAACTGGA TAAATAATGG AAATCTATTT
GAAATCATTG ATAGTAATTT CAACCTTGAT GATAAAGGGA AGTGGATGGT GTATAAAACA
ATCAGCAGGG CCAGTACAAC AAAGAAAGAA TTCGTAGATT TTCTTTTTAA TTATTATCAT
AAACATTTTA AGAGTAGAGA AGAAGTGGTT TTAAAAACAA TAAATAATTA TATTAACGAA
CATATAGAGG AACTGATAAA TTCAGTAAAT CAGGGCATGA AATATATATT CACAGAAAAG
AGCAATCTTT TAAATACAGA CCGGGAAATT AAAGTTATCG TTTCTTATTT TGGAGAGTAT
ATTGATATTA TTTTTCCATC TTCTCAACTA ATAATTGTTG GCTATAAATT TCCCGAATAT
GCATCTAAAG TTATGAGAGG TAAAAAGAAC CTTGAGGAAC AGGCCCATGT CTTTAAAGCC
CTTGGTGATA AAACCCGGTT GCTTATGCTG CAGCATCTCA GCCAGGGACC GAGTTATATG
ACTGAACTGG GTGAAAAGCT CAATATTAGT AATCCAACTG TAAATTATCA CTTAAAAAAA
TTTATAAATT CAGGATTAAT CAGGATAGAT AAAGAAGGTA ACAGAATTTA TTATAAATTA
TGTAAGGATA GAATAAAACA GGTAATTGAT ATACTGAAAG AAACCCTGGG ATTGTAA
 
Protein sequence
MKINTSNIIL HTNSSYELLI SLIRLAKNDE LQKLIREFNL NSKKEIHDWV KNTLNSFNDN 
EKELLNYYFG TECLFSLGLI EYINSIEFRE NDLNIDRFIN GLKSLELNHF LYYLLKSNYV
GQKPLSPGFI NNWINNGNLF EIIDSNFNLD DKGKWMVYKT ISRASTTKKE FVDFLFNYYH
KHFKSREEVV LKTINNYINE HIEELINSVN QGMKYIFTEK SNLLNTDREI KVIVSYFGEY
IDIIFPSSQL IIVGYKFPEY ASKVMRGKKN LEEQAHVFKA LGDKTRLLML QHLSQGPSYM
TELGEKLNIS NPTVNYHLKK FINSGLIRID KEGNRIYYKL CKDRIKQVID ILKETLGL