Gene Hore_08930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08930 
Symbol 
ID7314889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp965824 
End bp966501 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content35% 
IMG OID643611332 
ProductMscS Mechanosensitive ion channel 
Protein accessionYP_002508644 
Protein GI220931736 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTGGT TAGATAACTT TATTAATATA AATTCAGAAT ACAGAAACAA ATTAATTTAT 
ACAGTTATTA TTGTTACTGT TATAGCAATT ATAAGGTGGG GTATTAACAA AATAATTAGT 
TCAAAGGTTG ATGATGTTGC TCTTAAATAC AGATGGAGAA AGGTATCAAA TTATTTATCT 
TTTTTATCAG GAATAATATT TGTGTTACCC CTCTGGTTAA AAGGGTTTCA ATCCCTGATG 
ACTTTTCTGG GACTGTTTTC AGCTGGTCTG GCTATTGCCC TCAGAGATTT GCTTTCTAAT 
CTTGTAGGGT GGTTATTTAT AATCTGGAAG CGACCTTTTA CCCTGGGAGA CAGGATTCAA 
ATTGGAGAGT ACTCAGGTGA TGTTATAGAT ATACGAATAT TTCAGTTTTC TTTAGTTGAG 
ATTGGTGAAT GGGTACAGGC AGATCAGAGT ACCGGAAGGG TATTACATAT TCCCAATGGG 
AAGGTATTAA ATACCAGTGT GGCCAATTAT ACTGCCGGAT TTGAGTATAT ATGGAACGAG 
ATACCGGTGC TGGTAACCTT TGAAAGCAAC TGGGAGAAGG CCAGACAAAT ATTACTGGAT 
ATTGTGAGTA AATATGTTGA GGATACTGAA AATATTGTTC GAAAAAAAAA CTTAAACAGG 
CATCAAAAAA ATACCTGA
 
Protein sequence
MEWLDNFINI NSEYRNKLIY TVIIVTVIAI IRWGINKIIS SKVDDVALKY RWRKVSNYLS 
FLSGIIFVLP LWLKGFQSLM TFLGLFSAGL AIALRDLLSN LVGWLFIIWK RPFTLGDRIQ 
IGEYSGDVID IRIFQFSLVE IGEWVQADQS TGRVLHIPNG KVLNTSVANY TAGFEYIWNE 
IPVLVTFESN WEKARQILLD IVSKYVEDTE NIVRKKNLNR HQKNT