Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_08770 |
Symbol | |
ID | 7314864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 944335 |
End bp | 945069 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643611307 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002508628 |
Protein GI | 220931720 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000000139729 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACTTAA TAAAACAGGA CAGCCGCCCC CTTTATTTGC GTGTTAAAGA ATATATTGAA AATAAAATTA AAAAAGAAAT ATATAAACCA GGGGATCGTC TGCCATCAGA AACAGCTTTA TCTAATGAAC TGGGGGTTAG TAGAGCTACT TTAAGGGAAG CTTTAAGGGT CCTGGAAGAG GAAGGAAAGA TCGTAAAACA TCAGGGAATT GGAACATTTG TAAACCAACA AACTCCCAGA TTCTTAAAGG GGATTGAGGA ATTAGTAAGT GTTACCAAGA CCATTGAAAA CGCCGGTTAC ACTCCAGGCT CAAAGGTTTT AAGGTTAGAA GAAATATACC CGGATGACAA ATTATCTAAA AAAATGAGAC TGGATTCTTC CCATAAAATA TTAAAAATCG AAAGAATACG TACTGCCGAC AATCAACCGG TAGTATACTG CCTTGATCAT TTAGGATTAA AATATCTAGA AAATGGTATC AGTAAAAGGG ATTTTCAGGG TTCTTTATTT AAATTACTGG AAAATAAATA TGGAATTTTT ATAAAATACG CCCTGACCCA TATTGTGCCA TATATTACCG ACAAAAGTCT GGCTGAAAAA CTGGATATTA AAGAAAAAAG CCCGTTACTA TTGTTAGAAC AGTATCATTA TGATACTGAT GAACGGATGA TATTGTTTTC CCAGAATTAT TTCAGATCTG ACCAGTTTCA ATTTAAAGTA TTAAGAAAGC GTTAA
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Protein sequence | MDLIKQDSRP LYLRVKEYIE NKIKKEIYKP GDRLPSETAL SNELGVSRAT LREALRVLEE EGKIVKHQGI GTFVNQQTPR FLKGIEELVS VTKTIENAGY TPGSKVLRLE EIYPDDKLSK KMRLDSSHKI LKIERIRTAD NQPVVYCLDH LGLKYLENGI SKRDFQGSLF KLLENKYGIF IKYALTHIVP YITDKSLAEK LDIKEKSPLL LLEQYHYDTD ERMILFSQNY FRSDQFQFKV LRKR
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