| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_08610 |
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| Symbol | |
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| ID | 7314848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 926573 |
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| End bp | 928558 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643611291 |
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| Product | glycogen debranching enzyme, putative |
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| Protein accession | YP_002508612 |
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| Protein GI | 220931704 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGAGT TTTTACCTGA AAGCTGTCGG GAGCAGGCCT GTATGTTCAG AAACGAATGG
CTTGTTACCA ATGGACTTGG TTCTTTTGCC AGTTCGACTG AATCTGGAGC CAATACCAGA
CGTTATCATG GACTATTGAT AGCTTCGTTT AATCCACCGG TAGAAAGAAG ATTAATGGTA
AGCAAAGTCG ATGATACTCT CGTAATAGAT AATACCAGGG TTAACCTGGC ATCAAATTTA
AAAAATAAAG AACTTGAGGA CTCCGGTTAT AAATTTTTAT TATCTTTTAG ATATAAACCA
TATCCTGTCT ATGTTTATTC CTATAAAAGC TTTCTTATTA AAAAATCAAT ATTTATGGTT
CCCGGGAAAA ATATTACGGT AGTTCATTAT CATATTCTTG ATGGAGATTT TCCGGCCCTG
CTGGAACTAA CTCCAGTGTT AAACTCAAGG GACTTTCACG GGGAAACTAT ATTAAGTCGA
CCTGAACAGG ACCAGAAGAC CAGGGGCAAA TCTTATAAAA TTAATAGTTA TGATAAAAAT
TTTAAAAGTA TATCCTTCGA TTTAAATAAT TACCCCCTTT ATATGTTATG GGATAAAGGT
TATTTTAAAA TTAAAGAATC ATTTTATAAA AATATGTATT ATCCCTTTGA AGCTTACCGG
GGTCTGGGGG ATAGGGAAGA TCATTATCTA CCTGGAAAAT TAATTGTAGA TTTAGAAGAA
ACCTGTCAAT TTACAATTGT ATTTTCAACA GAGAGGGTAG AGAAAATTAA CTATAAGAAG
TGGAAAAACC AGTATATGGA TAAACAACAG TCTTTATTAC AGAATTACCC CAAAAAAAGA
AATACGTTTA TAGATCAGTT AATTAAAAGT GCCGATCATT TTATAGCTTA CCGGAGGTCA
ACCGGCAAGA AAACTATACT TGCTGGCTTT CCCTGGTTTA CAGACTGGGG CCGGGATACA
ATGATTTCCC TTCCAGGATT AACCCTGGCT ACCGGTAGAT ATAAAGAAGC CCGGGAAATA
CTGACTACCT TTGCATTAAA TATTAAAAGA GGCCTGTTAC CCAATGTCTT TGATGATTAT
TCTGGAGAAG CAGCCCAATA CAATACAGTA GATGCTGCCC TATGGTTTTT TTATGCTATT
TATAAATATT ATAAATATAC CCGGGATAAG GATTTTATAA AGAAAATAAT TCCGGGGCTT
AAAGAAATAA TCGAATACCA TATTCAAGGC ACTGATTATG ATATTAAAGT GGATAACGAA
GATGGCTTGC TCTGTGCCGG GAATCCATCC ACTCAGCTAA CCTGGATGGA TGTTAAAGTA
GAGGACTGGG TTGTAACCCC ACGCCATGGC AAAGCTGTGG AAATAAATGC CCTGTGGTAT
AATGCCTTAA AGATATATAA TTATCTAAGT AGTATTCTTA ACAGGGAACC TGAATTTATG
GATATTATAG ATAAAATTGA AGTAAATTAT GAGAAAAAAT TCTGGTATAA CAAAGGCAAA
TATCTTTATG ATGTTATTGA TGGTAACAGA AAAGATAAGA GTCTAAGACC AAATCAAATA
TTTTCAGTTA GTTTACCTTT TTCACTTTTG CCAGATAATA AAGAAAAGAT GGTGGTTAAA
AAGGTTATGG AAGAGCTCTA TGTACCCCTG GGGTTAAGGA GTTTGAATCC ATCTCATTCC
GAATATAAAG GTAAGTATTC AGGCAAGCGC CTGGAGCGTG ATGGGGCTTA CCATCAGGGG
ACTGTCTGGG GTTGGTTGAT AGGACCCTTT TTTGAAGCAT ACCTTAAGGT AAACAAATTT
TCACCACAGG CTAAAAAAAA TGTCCAGGAA ATGATGAAAC CCTTTTATGA TCATATAAAA
GAATATGGAC TGGGCAGTAT TTCTGAAATT TTTGATGGAA ATTACCCTCA TATACCCAGG
GGTTGTTTTG CCCAGGCCTG GTCTGTTGCC GAGATTTTAA GAATTTATAC AGAATATCTA
ATATAG
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| Protein sequence | MEEFLPESCR EQACMFRNEW LVTNGLGSFA SSTESGANTR RYHGLLIASF NPPVERRLMV
SKVDDTLVID NTRVNLASNL KNKELEDSGY KFLLSFRYKP YPVYVYSYKS FLIKKSIFMV
PGKNITVVHY HILDGDFPAL LELTPVLNSR DFHGETILSR PEQDQKTRGK SYKINSYDKN
FKSISFDLNN YPLYMLWDKG YFKIKESFYK NMYYPFEAYR GLGDREDHYL PGKLIVDLEE
TCQFTIVFST ERVEKINYKK WKNQYMDKQQ SLLQNYPKKR NTFIDQLIKS ADHFIAYRRS
TGKKTILAGF PWFTDWGRDT MISLPGLTLA TGRYKEAREI LTTFALNIKR GLLPNVFDDY
SGEAAQYNTV DAALWFFYAI YKYYKYTRDK DFIKKIIPGL KEIIEYHIQG TDYDIKVDNE
DGLLCAGNPS TQLTWMDVKV EDWVVTPRHG KAVEINALWY NALKIYNYLS SILNREPEFM
DIIDKIEVNY EKKFWYNKGK YLYDVIDGNR KDKSLRPNQI FSVSLPFSLL PDNKEKMVVK
KVMEELYVPL GLRSLNPSHS EYKGKYSGKR LERDGAYHQG TVWGWLIGPF FEAYLKVNKF
SPQAKKNVQE MMKPFYDHIK EYGLGSISEI FDGNYPHIPR GCFAQAWSVA EILRIYTEYL
I
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