Gene Hore_05660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_05660 
Symbol 
ID7313538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp616494 
End bp616985 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content37% 
IMG OID643610996 
ProductColicin V production protein 
Protein accessionYP_002508318 
Protein GI220931410 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCAAA TAACAATTCT AGATATATTA ATATTGGTAG TTTTCCTTTA TTTTGTCCTC 
AGGGGATATA ATAATGGATT TATCAAACAG ACAAGTACTG TGGTGGGACT AATACTGGCC
CTCTTGATTG CAATTAAATT TTACCAACCT TTTCAAAAGT ACTTGCTTCC ATATCTGGAT
TTTTCTGATC AGATAATGCA ATTCATTAGT TTTTCTCTTT TATTTGTTTT TGTTAATATT
ATAATACAGT TACTCGGGAG AGCCTTAAAA AATATTATGA ATGCCCTGTT TCTGGGTCCG
GTTGACCAGG TAGCCGGTGC AGCCTTAGGG CTGTTAAAAG CCGGTATTTT AACCTATTTT
CTGGTTCTCT TTCTGGCCCA GATACCGTAT CAGGGAATAA CAGAATTGCT TAACAGGTCG
GTTCTGGCCG GGAGTCTGCT TGAGATGACT CCACTGGTTA AACAGCGATT ATCTCAGATT
TTTGGGCCAT GA
 
Protein sequence
MNQITILDIL ILVVFLYFVL RGYNNGFIKQ TSTVVGLILA LLIAIKFYQP FQKYLLPYLD 
FSDQIMQFIS FSLLFVFVNI IIQLLGRALK NIMNALFLGP VDQVAGAALG LLKAGILTYF
LVLFLAQIPY QGITELLNRS VLAGSLLEMT PLVKQRLSQI FGP