Gene Hore_03620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_03620 
Symbol 
ID7314037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp370625 
End bp371800 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content39% 
IMG OID643610788 
Productphage integrase family protein 
Protein accessionYP_002508118 
Protein GI220931210 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000382884 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGAG GAGCTGGGGA AGGAACTATT GTTAAACGTA AAGATGGCCT ATGGCAGGGA 
GCCGTTACAA TTGGGACAGA TCCGCAGACC GGGAAACAGA AGCGTAAATA TTTTTATGGC
AAGACTAAAA AAGAAGTTGC AAAGAAAATG ACAGAATTAA AGATGAAACT GTTTAACGGT
ACATATTCAG AACCTAGCGA AATGAAGTTA ATAGATTGGC TTCACAGGTG GATTGAAGGC
CGGAAGTCCA CATTAGCATA TAGCACATAC AGAAACTATA AAGTTATGAT TAACAACCAT
TTGGCCGATG ATATAGGGGA AACAAAACTA AAAGATTTGA AGGCCCGGCA GGTGCAGGAA
TTACTTAATG ATAAATTGGA GAAGGGTAAA GTTTATGGGG AAGGTGGTTT ATCCCCCAGA
ACCGTTAAAT ATATCTATTC TACATTACAC ACAGCGCTTG AGCAGGCAGT CAAGGAGAAT
ATGATACCAC GTAACATTTG TAAAGCCGTT GAGGTCCCTA AAAAGCAGGA AGAAAAGAAG
CTGCATACCT GGAATAAGAA ACAGGTTAAC ATATTCCTGA AGGCAGCCAG AGACTACAAA
TATTTTATTC TTCATTACCT TGCATTAAAT ACCGGCATGA GAAGAGGGGA ATTATTAGGC
CTGCAATGGA AGGATATTGA CATGGAGAAA AAGCGAATTG AGGTAAAACG ACAGTTGGCC
CGGACAGATG AAGGACTGAT TTTCAAAAAA GTAAAGACAA AATCAGGTAA TAGGACCATA
CCAATAACTG ATAATGTAGT AAGGGAATTA AAACGACATC AAATAAAGCA GGGTGAAAAA
CGGTTAGCAT TGGGAGAAGC ATACAATAAA AAAGCAGATT TAGTTGCAAG TAATGGAATA
GGTAACCCGA TAGATCCCCG GAATTTAGTA AGAGATTTTA AGGATATAAT AGAGGAAACT
GGATTACCTG AAATAAGGTA TCATGATTTA AGGCATACCT TTGCTACTCT ATTCCTGGAA
GCGAAAGGGC CAATTAAAAC CCTGCAGCAG ATATTAGGAC ACTCTTCCAT TACAGTAACA
ATTGACACTT ATTCACACGT AACAGAGGAA ATGCTAATTG AAGCAGAACG GAAAATGGAA
ACTATGTTTA AGGTTATTGG TAATGATAAA GAGTAA
 
Protein sequence
MARGAGEGTI VKRKDGLWQG AVTIGTDPQT GKQKRKYFYG KTKKEVAKKM TELKMKLFNG 
TYSEPSEMKL IDWLHRWIEG RKSTLAYSTY RNYKVMINNH LADDIGETKL KDLKARQVQE
LLNDKLEKGK VYGEGGLSPR TVKYIYSTLH TALEQAVKEN MIPRNICKAV EVPKKQEEKK
LHTWNKKQVN IFLKAARDYK YFILHYLALN TGMRRGELLG LQWKDIDMEK KRIEVKRQLA
RTDEGLIFKK VKTKSGNRTI PITDNVVREL KRHQIKQGEK RLALGEAYNK KADLVASNGI
GNPIDPRNLV RDFKDIIEET GLPEIRYHDL RHTFATLFLE AKGPIKTLQQ ILGHSSITVT
IDTYSHVTEE MLIEAERKME TMFKVIGNDK E