Gene Hore_03320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_03320 
Symbol 
ID7314718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp342007 
End bp343113 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content37% 
IMG OID643610755 
ProductABC transporter related 
Protein accessionYP_002508088 
Protein GI220931180 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGTG TAATTTTTGA AAATGTTACC AAAATGTATG GAGAAAAAGT GGGTATAAAA 
GATGTATCCC TTGAAATATA CGAAGACGAA TTTTTAGTTA TTGTTGGGCC TTCTGGGGCA
GGGAAGACAA CCACCCTGAA AGTAATCGCT GGTCTTCTGG ATATAACTGA AGGCAATTTA
TATATAGATG GACGAAATGT AAATAAAATA CCTCCTCGCG ATCGGAATGT AGCGATGACT
TTTGAATCCT ATGCTTTGTA CCCACATTAT ACAGTTTTTG AAAATATGGC CAACCCGTTG
CGGGCACCTC ACATGAATTT TACTGAAAAA GAAATTGAAG AAAAAGTTGA AAGGATAGCT
GGAATGCTGG AGATAGATCA TCTTTTGGAG AGATTTCCAA AAGAGCTTAG TGGTGGCCAG
AAACAAAGGG TATCTCTGGG TCGGGCTATG GTAAGGGAAC CATCAGTTTT TCTACTAGAT
GAACCTCTGT CACATGTGGA TGCTAAAGTT AGGCATAGGA TGCGCCTTGA GCTAAACCGG
CTTCAAAAAG AGTTAAATGC TACAACTGTA TATGTAACCC ATGATTATGT AGAAGGGTTA
TCATTAGCAG ATCGAATTGT TATTTTAAAT GAAGGTGAAA TTATCCAGGT GGGAACACCG
CATGAAATCT ATAATGATCC TCTAAATGAG TTTGTTGCCA CTCATGTGGG GCAACCTGAG
ATGAATATAT TTGACGCCTT GGTTTCTCTA GAAAATGGCA AGATTATTTT AACAAATCAG
GAGAGTAATA AAATTAAATT TGTTCTTGAG GGTGACACAG CCGAGCTAGT AAAAAACCAT
GGCAAAAATA AAGTAAGGGT CGGTATAAGA CCCCAGGATA TAAAAATAAC TTCACAGGAA
AAAGGAGATT TTAATGGAAA GGTATATGTC TATGAACCCT TTGTAACTTA TGGGATATTA
ACAGTAAATG TGAGGGGAAT TCAATTACAA ATATTAACAG AACATGATAG CCAATTTAAT
ATTGGTGATA ATATTGCCTT AAAAGTTAAC CCTGATGACT TATACCTGTT TGATAAAGAA
TCCGGAATGA ATCTGGAACA TTTATAA
 
Protein sequence
MGSVIFENVT KMYGEKVGIK DVSLEIYEDE FLVIVGPSGA GKTTTLKVIA GLLDITEGNL 
YIDGRNVNKI PPRDRNVAMT FESYALYPHY TVFENMANPL RAPHMNFTEK EIEEKVERIA
GMLEIDHLLE RFPKELSGGQ KQRVSLGRAM VREPSVFLLD EPLSHVDAKV RHRMRLELNR
LQKELNATTV YVTHDYVEGL SLADRIVILN EGEIIQVGTP HEIYNDPLNE FVATHVGQPE
MNIFDALVSL ENGKIILTNQ ESNKIKFVLE GDTAELVKNH GKNKVRVGIR PQDIKITSQE
KGDFNGKVYV YEPFVTYGIL TVNVRGIQLQ ILTEHDSQFN IGDNIALKVN PDDLYLFDKE
SGMNLEHL