Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3418 |
Symbol | |
ID | 7312490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 3972037 |
End bp | 3973608 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643610323 |
Product | hypothetical protein |
Protein accession | YP_002507686 |
Protein GI | 220930777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.377883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA AAGAAACCAT ATCAGGAACT CCAGGTTCCC CGGTGCCCCC GCCATATTAC GCAAGCTATG TTCCAAGAAA TAAAAAACCC GAATATCAGG GATTTAAATC ACTTGTCACC TCTTCCAAAG GATTGACTAT CTCCGTACTA AGTATTGCAT TATGTATATT ATTTTTAGAA ACGATTTTTT ACCAATCTCC AGGAATAGCT GCTCCAATAT ATCTTTCCGC CTTTTATTAT AGCCTTTATT ACTTCTTTAG AGAAAATAAT ACACCTATTA ATAGAACTGC TATACTTTTA GCAATACCGG CAATGCTAAT GGCAGTAAGC TTTTTTATTC ACTACAATCC CAGTACCAGA TGGATCACAT GGCTTACTTT GATAGGAATT ATATGTATAC AGCTAATCCT TCTTGGAAAC CTTAAGATAA ACAGTATATT TTCCTTGGAT ACATTTGTAA AAGTCATTAT AAACCTATTC GCTAAACCGT TTACTAATCT TGCAATGCCT TTTCATTCTT TTGGAATACT TAAGAACAAG AAATCTACTA CTGTTAAAAA CCTATTTTAT GTCTTGCTAG GTATAATCAT AGCTATACCT GTTGCTGCTA TCCTTATGGG TTTATTTGTT AGGGCAGATG CAGTTTTCGC TGCATCGGTA AAATCCTTTA AAACTTTTAT AGGGCTGGAC TTAGGCAGAA TAACCTTAGA TATATTTTTG GGGCTTCCAG CAGGTATATT TCTTGGTGCA GCATTATTAG GCTTAAAGTA TGAAAAACAT AAAGAAAAAA CCTTAAAAAA TGTGGATGGG TGCATAAACA CAATTATCAC GGGTACTTTC TTGTCTATTA TAAACATATT TATAATAGCA TTTGTAGGAT TTCAGTTTAT GTACCTTTTC GGTGGATCAG ACAATATTAA AATTACCGGA TTAAGCTATG CAGAGTACGC AAGACGAGGC TTCTTTGAGC TATGTACTGC TTCGGCAATA ATATTTGCAA TTGCCCTTTT TGTAATAGGT ATGACAAAGA AAACTAACGG AAAGCTTCCC CTATGGGTAA GCCTTGGAAC AGTAATCCTA TGTGCAGGTG ATGGTATTTT GCTTATATCT GCCGTTAAGC GTATGTTCCT GTATATCAGT GCATATGGTC TTAGTATCAA ACGTGTCCTG ACACTTTGGC TTATGGCTGT AATTGGATTA TGTCTACTAT GGATGATAAT CAAGTGTTTT AAAATAGGAA TAGATGTTAA AAAGTGGATA GGAATCACTA TAATTGTAGG AGTATGCATA TTAAGCCTTA TTAACATAGA AAAAATAATT GCCGACTACA ATGTAGACAG CTACCTTAAA AATCCTGATA ACCCAACAAT AGTACACTAT TTAGATCAAC TGTCTTTTAC AGCAACTCCC CAACTGGAAA AGCTCAAGGA TTTATCAGAG AGCCAAAAAA CAGATATAAA GCTTAATGAA ATTATAGAAA ATAAAAAGTC CCAGCTTGAC GGCAGAAACA AGTTATACGG CTTTACACTC GATAGCATTG AGGCATCAAA GGTACTTAAT AAGTCCAAGT AG
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Protein sequence | MENKETISGT PGSPVPPPYY ASYVPRNKKP EYQGFKSLVT SSKGLTISVL SIALCILFLE TIFYQSPGIA APIYLSAFYY SLYYFFRENN TPINRTAILL AIPAMLMAVS FFIHYNPSTR WITWLTLIGI ICIQLILLGN LKINSIFSLD TFVKVIINLF AKPFTNLAMP FHSFGILKNK KSTTVKNLFY VLLGIIIAIP VAAILMGLFV RADAVFAASV KSFKTFIGLD LGRITLDIFL GLPAGIFLGA ALLGLKYEKH KEKTLKNVDG CINTIITGTF LSIINIFIIA FVGFQFMYLF GGSDNIKITG LSYAEYARRG FFELCTASAI IFAIALFVIG MTKKTNGKLP LWVSLGTVIL CAGDGILLIS AVKRMFLYIS AYGLSIKRVL TLWLMAVIGL CLLWMIIKCF KIGIDVKKWI GITIIVGVCI LSLINIEKII ADYNVDSYLK NPDNPTIVHY LDQLSFTATP QLEKLKDLSE SQKTDIKLNE IIENKKSQLD GRNKLYGFTL DSIEASKVLN KSK
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