| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3411 |
|---|
| Symbol | |
|---|
| ID | 7311972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 3963560 |
|---|
| End bp | 3964483 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643610316 |
|---|
| Product | GumN family protein |
|---|
| Protein accession | YP_002507679 |
|---|
| Protein GI | 220930770 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TACTACCTAT TGTTGCCTTA ATCCTTATTC TATGCCTTAC CTTGACCTTG
GCATCTTCAG CTTCCACAGA AGTCCTGTAT ACCCAGAATA GCCATGTAAG TATGTGGAAA
ATTACATCCC GGATTACTGC CTCTGAAGGA AATATTATGT ATCTCCTTGG ATCATTATCT
GTTTCAGAAA AAAGCATATT CCCTCTAGAA AATCAGCTTG AAAAGGTATA CGAGGAATGT
TCAAAAATTG TTGTAGAAAC GGACATTTCT AAAACAACTC AGGATCAAAC TGTAACAGCT
TTATTAAAAT ATGGACTGCT ATCAAAGACA ACTATAGACA AGGTATTAAC AAAGGAGCAG
TATACCAAAG CAGACAACCT TATAAAGAAG TATACACTAA ACAAAAAATC ACTTTCTGCT
TATAAAAGCT TTATGCCCTG GGTTATAGAT AGTCTTATTG CCAATCTGGC ATTTAGTAAT
TCGCAAAATT TCATACAAAA CCCTGTCACC TCCTATTTTT TAGAAAAGGC AAAAAAAGAC
GGAAAGTCAA TAGTTGAACT TGAGTCTCCC AATTCACAAC TAAAAAGACT TAGCTCAATG
TCGTACTCTC TTCAAGGTGC AATGCTTGAA AATACTATTA TGTTTGCAGA AAAAGGACCT
GAAACTGTAA AAAATGCCAC TGAGTTATGG AAAGACGGTG ATATCGAGGG CCTCAATGAG
CTATATACTT TTTATAAGGG CTCTCAAGCA GCAGCTTATA ATACTTTTCT TATTGAAAAA
AACAAAAAAG TCTGCGAGTA CATTATCAAA TGTCTGAAAT CAGGAGGCAA ATATTTTACG
ATAACAGATA TTTCAATGCT TACGGGAAAA AGCGGTATTA TTAATATGCT CAAGGAAAAA
GGCTATAAAG TAGAACAGCA GTAA
|
|---|
| Protein sequence | MKRILPIVAL ILILCLTLTL ASSASTEVLY TQNSHVSMWK ITSRITASEG NIMYLLGSLS
VSEKSIFPLE NQLEKVYEEC SKIVVETDIS KTTQDQTVTA LLKYGLLSKT TIDKVLTKEQ
YTKADNLIKK YTLNKKSLSA YKSFMPWVID SLIANLAFSN SQNFIQNPVT SYFLEKAKKD
GKSIVELESP NSQLKRLSSM SYSLQGAMLE NTIMFAEKGP ETVKNATELW KDGDIEGLNE
LYTFYKGSQA AAYNTFLIEK NKKVCEYIIK CLKSGGKYFT ITDISMLTGK SGIINMLKEK
GYKVEQQ
|
|---|
| |