| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3062 |
|---|
| Symbol | |
|---|
| ID | 7311663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3606409 |
|---|
| End bp | 3608367 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643609964 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_002507334 |
|---|
| Protein GI | 220930425 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TATTATCGAT AGATATCGAG ACCTACAGCA GTGTAGACCT TATAAAATGT
GGGGTATACC GGTACGTTGA AGCTCCTGAC TTTGAAATAC TTCTGTTTGC ATATGCGTAC
GATGATGAAC CTATAACTGT TATAGACTTG GCAGACTTCG AAGAGTTACC GGAACAAGTA
ACGAAAGACC TTACAGATCC AGACGTAATA AAAGCTGCCT ATAATGCTAA CTTTGAAAGA
ACCTGTATAG CTAAATTCTA TAATAAGCCA ATGCCTCCAG AGCAATGGAG ATGTACGTCG
GTTCACGCTT TAACTTTAGG GCTCCCGGGC AACCTTGACG GAGTGGCTAA GGTTCTCGGG
CTTGATGCAC AGAAGGACAC TGCAGGAAAG AACCTTATAA AATACTTCTC AGTTCCCTGC
AAGCCTACAA AAGTAAATGG TGGTAGGACC CGTAACTTTC CACACCATGC ACCTGATAAA
TGGAAGCAGT TCAAGGACTA TTGTAAACAG GATGTTGTTG TTGAAAGGGC GATAAGAAAG
AAAATAGAAA AATACCCTGT TCCAGAACAT GAGTGGAAGC TCTGGACTTT GGATCAGAAA
ATTAATGATG CAGGTGTAAG ACTTGATCCA GTATTAGTCC AGCAAGCTTT AAAGTGTGAT
TTACAGTATG CAACAAGACT TGATGCAGAG GCAAAGGAAC TGACAGGCCT TGATAACCCG
AATAGTACTA CTCAATTAAC TGTATGGCTT AAAAAACAAG GATTGACTGT AGATAACGGG
CTTGGCAAAG ACTATATACC CGGGTTATTA GATCAGGCTA AGGGCGATGA GACAGTAACC
AGAATGTTGG AGCTCCGGAA AGAAATGTCT AAAACTAGCA CTAAGAAGTA TGAGGCTATG
GAACGGGCAA TGTGTTCGGA TGATAGGGCA AGAGGATTAT TGCAATTCTG TGGGGCTAAT
CGTACATGGC GCTGGGCGGG AAGATTAATT CAAGTTCAGA ACCTGCCACA GAACAAAATT
CCTGATTTGG GAGTAGCTCG AGAGTTGTTA CATAGTGGTA AATTTGAGGC AATAGAACTT
CTTTTTAATA GCCCGCCGTT TGTGTTATCA CAGCTAATTA GAACAGCTTT CATTCCTTCT
GACGGTTGCA GGTTTATTGT GTCGGACTTC TCGGCCATCG AGGCCAGAGT AATAGCTTGG
TTAGCAGGAG AGTCGTGGCG AATGAAGGTA TTTAAAAGTC ATGGGAAGAT ATATGAGGCT
TCTGCATCCC ATATGTTTCA TGTACCCATA GAGGAGATTA CTAAAGGAAA TCCACTTAGG
CAAAAAGGAA AAATCGCAGA ACTTGCTCTC GGATATGGTG GTAGTATTGG AGCCCTTGAA
GCAATGGGTG CACTTAAAAT GGGGCTTGAT GCAGATGAGC TTCCAGACCT TGTCACAGCC
TGGCGTAACT CAAACCCTAA AATCGTTAAG CTTTGGTGGG ACGTCGATAA AGCTGCTATG
ACAGCTGTGC GAGAACACAT GCCTGTTAGA ATTCAGTACG GTATTACCTT CTCTTATAAA
GATGGGTTTT TATTTATTAA ACTACCATCG GGGCGAAAAC TGGCTTATGT AAAACCCAAA
ATAAAGGATG GTAAATTCGG ACGTCCTGCA CTTACATATG AGGGAATGGA CCAGATAAAA
AAGACTTGGG AACGTATAGA CACCTATGGC CCCAAGTTGG TTGAGAATAT TGTGCAGGCT
GTAGCGAGGG ATTGTTTAGC AGTTAATATG CTAAGACTCG ACGATGCAGG ATATGACATA
AGAATGCATG TACACGACGA AGTAATATTG GACGTACCTA ATACCGATAC AGATGCTCTT
GCACAAGTAA ACGAAATAAT GAGTCAGCCT ATAGATTGGG CTCCTGGGTT ACCTCTCAGG
GCAGATGGAT ATGAAACTGA ATTTTATAAA AAAGATTAG
|
|---|
| Protein sequence | MKKILSIDIE TYSSVDLIKC GVYRYVEAPD FEILLFAYAY DDEPITVIDL ADFEELPEQV
TKDLTDPDVI KAAYNANFER TCIAKFYNKP MPPEQWRCTS VHALTLGLPG NLDGVAKVLG
LDAQKDTAGK NLIKYFSVPC KPTKVNGGRT RNFPHHAPDK WKQFKDYCKQ DVVVERAIRK
KIEKYPVPEH EWKLWTLDQK INDAGVRLDP VLVQQALKCD LQYATRLDAE AKELTGLDNP
NSTTQLTVWL KKQGLTVDNG LGKDYIPGLL DQAKGDETVT RMLELRKEMS KTSTKKYEAM
ERAMCSDDRA RGLLQFCGAN RTWRWAGRLI QVQNLPQNKI PDLGVARELL HSGKFEAIEL
LFNSPPFVLS QLIRTAFIPS DGCRFIVSDF SAIEARVIAW LAGESWRMKV FKSHGKIYEA
SASHMFHVPI EEITKGNPLR QKGKIAELAL GYGGSIGALE AMGALKMGLD ADELPDLVTA
WRNSNPKIVK LWWDVDKAAM TAVREHMPVR IQYGITFSYK DGFLFIKLPS GRKLAYVKPK
IKDGKFGRPA LTYEGMDQIK KTWERIDTYG PKLVENIVQA VARDCLAVNM LRLDDAGYDI
RMHVHDEVIL DVPNTDTDAL AQVNEIMSQP IDWAPGLPLR ADGYETEFYK KD
|
|---|
| |