| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3003 |
|---|
| Symbol | |
|---|
| ID | 7312435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 3555006 |
|---|
| End bp | 3556196 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643609907 |
|---|
| Product | glycosidase PH1107-related |
|---|
| Protein accession | YP_002507277 |
|---|
| Protein GI | 220930368 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2152] Predicted glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.87538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTTG ATGAGAGATT GAATTATTTT ATCCAAAAAT ATAATGGATT GATTAAAAGA
AAAAACTCCG TTCAAGAAGG CGGAAACGGC ATATACGATA AATACATATA TCCTGTAATA
ACCAAGGACC ACACACCTCT TTTCTGGAGA TATGACCTTG ACAGGAATAC TAATCCCTAT
CTTATGGAAC GCCTCGGCGT CAATTGTGCT TTCAACCCGG GAGCTATTGA GCTTAACGGG
AAAATATACC TTGTAGTACG TATAGAAGGG AACGATAGAA AATCCTTCTT TGCAGTGGCT
GAAAGTGAAA GTGGCATTGA TAACTTCACT TTCTGGGATT ACCCTGTGGT AATGCCGGAA
ACAAAAAACC CTGATATCAA TATATATGAC ATGAGGCTTG TAAAACATGA GGACGGTTGG
ATTTACGGTC TTTTCTGTAC AGAGAGAAAA GACCCGGAGG CTGCCTGCGG CGATACCTTC
AGTGCAGTAG CGGCATGCGG CATTGCTAGA ACTAAAGATT TAAAATTATG GGAGCGTTTG
CCTGATTTGA AAACAGCATC ACCTCAACAG AGAAATGTGG TCCTTCACCC AGAGTTCATA
AAGGGAAAAT ATGCCCTTTA CACACGTCCT CAGGACGGCT TTATCGAAAT AGGAAAGGGC
GGCGGAATAG GATTCGGTTA TACCGACAGT ATGGAAAATG CTGTTATATA TGAAGAAATA
CTGATGGAAT GCAAGGAATA CCACACTATT AAAGAGGTCA AAAACGGCCA AGGGCCCACC
CCTTTGAAGA CTGAAAAAGG CTGGCTTCAC ATTGCCCATG GCGTAAGAAA TACGGCTGCC
GGACTAAGAT ATGTTGTATA TGCCTTTCTT TCCGACCTTG AACATCCCGA AATTGTAACC
CATCGTCCGG GTGGCTTTTT AATCGCTCCT GAAGGTGAAG AACGAATCGG GGACGTTTCA
AATGTGGTCT TCTGTAACGG TGTTGTAGCC AGACAAAACG GAGATGTTCT TATTTACTAT
GCTTCCTCCG ATACACGTTG CCATGTAGCT TCTACCACTA TAGACAAGCT TCTGGACTAT
GTCATTAATA CCCCGGAGGA CCCTCTAAGA TCCTATGCAT GTGTGCAGCA GAGAATTGAC
CTGATTTCAA GAAATTTGAG GCTGATTAAG AATAACACTG TTTCTGTGTA A
|
|---|
| Protein sequence | MVFDERLNYF IQKYNGLIKR KNSVQEGGNG IYDKYIYPVI TKDHTPLFWR YDLDRNTNPY
LMERLGVNCA FNPGAIELNG KIYLVVRIEG NDRKSFFAVA ESESGIDNFT FWDYPVVMPE
TKNPDINIYD MRLVKHEDGW IYGLFCTERK DPEAACGDTF SAVAACGIAR TKDLKLWERL
PDLKTASPQQ RNVVLHPEFI KGKYALYTRP QDGFIEIGKG GGIGFGYTDS MENAVIYEEI
LMECKEYHTI KEVKNGQGPT PLKTEKGWLH IAHGVRNTAA GLRYVVYAFL SDLEHPEIVT
HRPGGFLIAP EGEERIGDVS NVVFCNGVVA RQNGDVLIYY ASSDTRCHVA STTIDKLLDY
VINTPEDPLR SYACVQQRID LISRNLRLIK NNTVSV
|
|---|
| |