| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2922 |
|---|
| Symbol | |
|---|
| ID | 7311537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3480348 |
|---|
| End bp | 3482225 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643609822 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002507196 |
|---|
| Protein GI | 220930287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00129272 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA AAACTAAGCC GTCACCTAAA CTTAATAAAA GAATTGATAA TCTGGTCAGA
GTTGTTTTAG TTCTGTCAAT TGCCATAATA GTCTTTTTCT TCGCAATCCG GCCTATGATT
TTTAAAAAAG ACTATTACTT TGACTCCGGT GATGATGTTA CCCTTGAAAA TTTAGGAACT
GATAAAGGTA CAGATATTTA TGATATAGCT GTAGTTGGTG ATGGTATTGA CGGAATAAGT
GCCGCGCTGG GAGCTGCTGG TGTGGGTGCC AAAACTATTC TTATATGTTC CGATAAGGAG
CTCGGAAGTC AGATTGGAGA GTCTTTTAAC ACTAGCTGGT CACCTGATGT TACTCCAACA
GGTAATAACG TAAGCTCTGA CATATTCAAA GAAATCCGAT ACAAATCCGG TGAAGGTATA
AATATAGGTA ATTATTTAAA AACAATCAAG GAAATGGTTT CTGAGAAAAA GAACCTTGAC
GTAATGTATG AATCCCAAAT AACTGACATG GGAGTTCAGA GTGGTCAGGT GCAAAATATA
CAGTTTGACA CTCCTAAAGG TAAAAGGACT GTAAAAGCAA AACAGTACAT AGACGCTACA
AACGATGGAG AAATTCTTAA ACGTGCCAAT GTACCGTATA GCGTCGGATA TAGCGATATT
GGCATAAAAC AGCTGTTTCC CCCTATTTAC CTGAATTTTA TGGTATCGGG AGTCGATTAT
AAAGAGATTG AAAAATTAAT GAAGGAGCAG AAAATGCTTG TTAACAGCAT TCTGAAACAA
TATAACACAA GTAATTCAAA TGTAAGTGTT TCAGGATTTA ATATTTCAGA TCAGGGTAAC
AGTAAGGTAC TGATTGAAGG AATTACCGTC AAAAATGTAG ATTTACAAAA TGAGAAGAAG
ATTCAGGAAT ATTACAATAT TGCTTCAAAA GAATGTATGG ACTTGTTCCA ATTTCTAAAG
CTAAACCTGG AACCATTTAA AGATGCTGGA GGATTCAGCG TAGCGGCACA ATTTGTTAAG
CCTTCAGCCT ACCACTTCAA GGGACTTTAT AACCTAACAC TTGGGGATAT ACTTACAGGT
AAGAGATTTA GTGACAGAAT CAGCACGGCA TCAAGACCTG TAACAATGAC AATGGAGGAC
GGAAACGGAT ATATCCTCTG TAATCCCAAG ATATTTTACA TACCTCTTCG GTCCATAATT
CCTCAAGGTC TAACTAATGT ACTTATGACA GGTGACAAAA TATCCTGTTC ATCTCTGGTA
CAGAGTGCCA TAAATTCAAA TTCCAGTAAG TCCGGTTCTG GATATGCCGC AGGGATAATC
TCCGCCTACA GCATTTCAAA GAGTATAGAT ATTCCCCATA TAGTAGAGGA TTACAATCTG
GACACGCAGG CTGAATTGGA GAAGGTATTG CGGAAAAAGG GCATATTCAT GTCAGATATT
ACAGAGGACT TGACAAGTAT AACGGAAAAC TGGAGTTATC CTTACGCAGA AAAGCTTATA
AACATAGGGT TGCTTAGTGC AGGTATCACA AATGACATGA AATTCAATAA GAAAGCAAAG
AGTCAGGATT TTGCCTATGT AATACTAAAT GGTGTGGTCA GGACTTCACC CGATAAATAC
AATTATGATT TTGATACAAT CCTTAGAGCA TATCTAAAGG ATGAGCCGTT AACCAAGGAT
AAGCTGGCAC AAATACTTTT GGATGTAGCG GGGAAGAAGA CTTCAGGCGA AAATTATTAT
GATGATGCCC GTAAACAAGG GCTTGTTGAT GAAACTCTTG AACAGAAGCT CAAGAATAAA
TCACATGTGG AGTACTCTGA TATGTATTAT GCAGCTGTTA AGGCTATTGA AAAGATAACA
GGAAAGCCAA TGAATTAG
|
|---|
| Protein sequence | MKKKTKPSPK LNKRIDNLVR VVLVLSIAII VFFFAIRPMI FKKDYYFDSG DDVTLENLGT
DKGTDIYDIA VVGDGIDGIS AALGAAGVGA KTILICSDKE LGSQIGESFN TSWSPDVTPT
GNNVSSDIFK EIRYKSGEGI NIGNYLKTIK EMVSEKKNLD VMYESQITDM GVQSGQVQNI
QFDTPKGKRT VKAKQYIDAT NDGEILKRAN VPYSVGYSDI GIKQLFPPIY LNFMVSGVDY
KEIEKLMKEQ KMLVNSILKQ YNTSNSNVSV SGFNISDQGN SKVLIEGITV KNVDLQNEKK
IQEYYNIASK ECMDLFQFLK LNLEPFKDAG GFSVAAQFVK PSAYHFKGLY NLTLGDILTG
KRFSDRISTA SRPVTMTMED GNGYILCNPK IFYIPLRSII PQGLTNVLMT GDKISCSSLV
QSAINSNSSK SGSGYAAGII SAYSISKSID IPHIVEDYNL DTQAELEKVL RKKGIFMSDI
TEDLTSITEN WSYPYAEKLI NIGLLSAGIT NDMKFNKKAK SQDFAYVILN GVVRTSPDKY
NYDFDTILRA YLKDEPLTKD KLAQILLDVA GKKTSGENYY DDARKQGLVD ETLEQKLKNK
SHVEYSDMYY AAVKAIEKIT GKPMN
|
|---|
| |