| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2431 |
|---|
| Symbol | |
|---|
| ID | 7311103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2932924 |
|---|
| End bp | 2933595 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643609362 |
|---|
| Product | pseudouridine synthase |
|---|
| Protein accession | YP_002506741 |
|---|
| Protein GI | 220929832 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCTA AAATTGTATA TGAGGACAAT CATCTACTAG TAGTAGAAAA GCCTGTAAAT
ATCCCTGTTC AGGCCGATAA TTCAAAGGAT ATTGACATGC TTACGTTACT GAAACAGTAT
CTTAAAGAAA AATACAATAA GCCCGGTGAA GTTTATCTTG GTCTGGTACA TAGACTTGAC
AGGCCTGTAG GTGGTGTAAT GGTATTTGCC AAAACATCAA AATGTGCGTC AAGGCTTTCT
GATCAAATAC GTACTAGAAC ATTTAAAAAG ACATATCTTG CTATAGTAAG AGGCGTTCCA
CAAAAGCAGA AAGATGAACT AAGGAATTTT CTTTTAAAAG ACAGCTCTGA GAACATGGTT
CATGTTGTAA AGGAAGGTAC AAGGGACGCC AAGGAAGCTA TTCTAGATTA TGAGGTACTT
AAATCAAATG GTGAATTAAG TTTATTGCAA ATACAGCTTC ATACGGGAAG ACCGCACCAG
ATAAGGGTTC AGCTTTCTCA TTCAGGGTAC CCCCTCTATG GGGATCAACG GTATGGAATT
TATGTAAACA AGCCCGGACA ACAAATAGCA CTTTGGGCGT CCTCATTAAC GTTGGAGCAT
CCCACTAAAA AGGAAGAAAT GACATTTGGC TGTGGAACAC CGGAAAAAAA ACCCTGGACT
GAATTAGTAT AA
|
|---|
| Protein sequence | MIPKIVYEDN HLLVVEKPVN IPVQADNSKD IDMLTLLKQY LKEKYNKPGE VYLGLVHRLD
RPVGGVMVFA KTSKCASRLS DQIRTRTFKK TYLAIVRGVP QKQKDELRNF LLKDSSENMV
HVVKEGTRDA KEAILDYEVL KSNGELSLLQ IQLHTGRPHQ IRVQLSHSGY PLYGDQRYGI
YVNKPGQQIA LWASSLTLEH PTKKEEMTFG CGTPEKKPWT ELV
|
|---|
| |