| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2427 |
|---|
| Symbol | |
|---|
| ID | 7311099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2927215 |
|---|
| End bp | 2928393 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643609358 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_002506737 |
|---|
| Protein GI | 220929828 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00147882 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGGAA ATACATTTGG CAGATTATTC AGGGTTACAA CATGCGGAGA ATCCTATTCG
GGAGCTTTTA GGAAGAATTC AGATATTCCG CCTGAATTGT GGGGCGGACT GGCAGTAATA
GTTGACGGTG TTCCCGCCGG ACTGAAAGTA ACTTCACAGA TTATACAGGA GGAACTGGAT
AAAAGAAAAC CTGGACAATC CCGGCTCCAC ACACCCAGAA CTGAAGCGGA TAAGGTCTAT
ATATTTTCAG GTGTAATGCA GGATGACAGA ACAACAGGAG CACCTGTATG TATGCTGATT
CCCAGCAGTG ATATTGGGGA TTATCATATA GAACAGCACA AGGGTAATAA GGACTTGTTA
AGACCCGGAC AGGCAGCGTA TACCTATTAT AAAAAATATG GGGAACATTC TGACTATCTT
GGAGCAGGAA GGGCCTCGGC GCGTGAAACA GTTGCAAGGG TGGCAGGAGG AGCAATTGCT
AAAATAATTC TCGATAGTAT GGGGATTGAT GTAATAGCGT TTACGATTGA GTCTCATGGA
ATAAAAGCAG GACCGTTTTC ATATGAAACG GCCAAACAGA ATTACAGAGC TAATGATATA
AACTGTCCCG ATTTGGATAT TGCAAAGCAT ATGATTGATG ACTTGCTTCA AGTAAAAAAG
GAGGGGGATT CCTGCGGAGG TGCAATAGAG ATAATAGCAA AGGGAGTACC TGCGGGACTT
GGAGAGCCTG TATTCGATAA GTTAAGTGCC ACAATTGCAC ATGGAATTAT GTCTATAGGC
GGTGTAAAAG GAATTGAGAT AGGAGATGGC TTTGGAGTAA CATCCAAAAA GGGCTCAGAA
TGTAATGACA CGCCTTATTA CGATGAGGAA ACAAGACGTA TCAGATTTAA AACAAACAGA
GCGGGCGGTA TGCTTGGAGG AATATCAAAC GGTGAAGAAA TTAGAATTCG TGTTGCTGTC
AAACCGACAC CAACTATTTT AAAGGATCAG CTGACAGTGA ATGTATCAAC TCTTGAACCG
GTTACCCATA AATTTGCGTC CAGAAGCGAC CCTTCGCTTG TACCGAGAAT ATACCCTATT
TGTGAAGCTA TGGTTAGAAT GGCACTGGTA GATAGTATAC TAATGGCTTC AGGTAGCAGG
AGCATAACAG ATATGGATAA CAGGTGGGAT AAGCTATGA
|
|---|
| Protein sequence | MLGNTFGRLF RVTTCGESYS GAFRKNSDIP PELWGGLAVI VDGVPAGLKV TSQIIQEELD
KRKPGQSRLH TPRTEADKVY IFSGVMQDDR TTGAPVCMLI PSSDIGDYHI EQHKGNKDLL
RPGQAAYTYY KKYGEHSDYL GAGRASARET VARVAGGAIA KIILDSMGID VIAFTIESHG
IKAGPFSYET AKQNYRANDI NCPDLDIAKH MIDDLLQVKK EGDSCGGAIE IIAKGVPAGL
GEPVFDKLSA TIAHGIMSIG GVKGIEIGDG FGVTSKKGSE CNDTPYYDEE TRRIRFKTNR
AGGMLGGISN GEEIRIRVAV KPTPTILKDQ LTVNVSTLEP VTHKFASRSD PSLVPRIYPI
CEAMVRMALV DSILMASGSR SITDMDNRWD KL
|
|---|
| |