| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2335 |
|---|
| Symbol | |
|---|
| ID | 7311010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2745034 |
|---|
| End bp | 2747838 |
|---|
| Gene Length | 2805 bp |
|---|
| Protein Length | 934 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643609263 |
|---|
| Product | copper amine oxidase domain protein |
|---|
| Protein accession | YP_002506651 |
|---|
| Protein GI | 220929742 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TATTAGGAAT ATTAACATTT GCGTTAATCA TAATAACGCT GATAACTTCT
GCAGGGGCAA ATTCAGATAG GATTAAAGTA AAAATTGAAA ATAAACCCAT AGAATTTGCC
ATGCCTCTTC AACTTGTTGG AAATCAGCTG TTTGTACCTT TCAGAGAAAC AATGACTCTG
TTTGGATATA ATGTAAGCTG GGATAAGAAA ACGAAAACAG CCGCAGCAAT AAAGAATCAT
AAACAGATAA CAGCAAAGGT TGGCAGCCGA GAGTTAACAG CAGACGGTAA AAAAATTTCT
TTTGGTGCAG CCGCATATTT ATATAAACAA AGGCTTTATG TCTCGGTCCA GGTAATTGAA
AGTGGATTAA ATAAAGTTAT TAAGTGGGAT AGTAGTGAAA ATACCTTATA CATATCCGGC
CAAAATACTA TTAATATTAA TGTTGAAAAT TCCAACGAAA GTGTAATAGC AGTAGGAAAT
AATATTTTGG TAAATATATC AAATAAGTAC GGAGTTAACC AAATTAACGA TATGATAAAT
GATGCAGACA AGATTCTGGA AAATAATAAC TTTACAGAAG CTATTGGCCT GTATGAAAAA
ATCCTTGAAA ATATTTCAAG CTCAGAAAAT CCTGAGGAGT ACGGGAGAAC CAAAGTTAAC
ATAGGTAATG CATATAACAG GCTTGCCGCA ATTATCCATG AGGAGGACAA TGCAAAAAAA
GCGATGATGG CGTACGGGGC GGCACTAAAA GTCAGTACTC CTGAAAAAAA CACTACTGTA
TATGCGGCAG CCCATAATGG ATTGGCATAT TCATATATTA TTTTGGCACA GGTAAGAGAT
ACAGAAAAAA ATATATCAAA AGCTCTGGAT TCATATGCCC AAGCCCTGAA AATATACAGC
CAGACTACAT ACCCGCAGGA GTATGCCCAA ATACAAAATA ATCTGGGAAA GGCATATATA
GTTCTCTCTG GTGTTAAAGA CCGTCAGAAA AACCTTGAAA CCTCTATTTT ATACTGTAAT
GAAGCTTTAA ATTTCTTTAC CCCGGAAAAA AATGCCTGGG AAAATATAAG AATACATAAT
ACTTTGGGAT TGATCTATAC GGGACTTGGG ATGATTGCAG ATACTCAAAA CAATATTTCT
AAGGCATTTA AAGAATTTAA TACGGTATTG GAGGTATGCA GTGTTGATAA ATATCCTGAT
GAATATGCAT ATGTTCAAAA CAATGTTGGT CAATGCTATG GAAAGCTGTC TGATATCAAA
GACCGTGAAG AAAACAGTAT AAAAGCCATT AAAGCATATA ACGAAGCCCT GAAGGTTATT
ACCCCGGAAA AGAATGCTAT TAACTATGCC GTAACTAATA TGTGTCTTAG TTATGCATAT
GTAAGGCTCT CAGAGGTAAG GGATTCCGGG GAAAATCTCA CCAAGGCAGC GGCTGCGTGT
AATGAGAGCC TGAAGGTTCT CACTATAGGG AGGTATCCAT TAAGCTATGC GGGTGCTCAG
AATAGGCTGG GAACAGTCTA TTTTAGTCTA TCAGATATAA GTTCCAAGAA AGACAATCTG
ACTAAAGCAA TAAGTGCGTA TAAAGAAGCT TTAAAGGTGT ATACTCCAAA TAAATATCCG
CTGGATTACT CTTTAAATCT TTATTCTTTA GGAAAATGTT ATAGAATCCT TAGTGAAATT
GATCACTCAG AAGCCAATAT CACAAAGGCT GTTGAAATGT ATAACGAGGC ATTGCAAATA
ATTACATTTG AAAAATACCC CATGTATTAT GCAGACGTAA AGAACAGCTT GGGAAATGCA
TATAGATATA TGTACTCATT AACCTTTCAG ATGGATAATC TATATAAATC TTTAGATGCA
TACAATGAAG CTTTAAGGGT GGACACTTTT GAAAGTCAGC CTATGAGTTA CGCTGTAATA
CAATGCAATC TGGCATATAC TTATATGTAT TTGGGCGATG TACTGGATGA TGAGGAGATT
ATAAATAAAT CCATTCAGGC ATCCCGGGAG GCATTAAAGG TATATAAATT TGACAAGTAC
CCGCTACTGT ACGCAGATAC AGTAATAAAT ATGGGTTCAG CATACTGGGC AATGTCTGAG
GTCAGGGATA CGGTAGAAAA TCTGGCAAAA ACCCGGGACA GTTACGAGGA ATCTCTGAAG
GTCTACACAT TGGATAAATA CCCCTTAGAC TATGCCTATT CCCAATATTG CATAGGATAT
GTATGCACTG CAATTGCCGA GGCAAGCCCC TCTGAAGATA CAATTAAAAA GGGCCTTGAG
GCATGTCAGG AAGCATTAAA AGTGTATACT TTTGAAGAGG ATTCCAGATA TTACATAGAG
GTCAGAGCAA ATCAAGCTGC ACTATATGTC CGCCTAGCAC AGTTAAAGGG CTCGGAAGAT
ATATTGAAGA ATTCTCAGGA GATTTATCAT GAATTGCAGA GTTACTTAAC TGACGAAAAT
GGACTTATTA ATGATCCGGG AATCAATTTG GACATGGGGT TTATGTATTA TGTTTTATCA
AAGTTAAAGG AAAAGGAAGA AAACCTGACA AGTGCAATAG AAGTCTATCA GAAGGCTGAA
ACCATGGTAC AGGAAAAAGA TAATCCTGCA ATGTATGCCA AAATCCAAAA ACAACTGGGA
GTTTGCTTTT TAGAAATGTC AGATGTTAAA GACAAGCAGG AGAATTTGAA AAAGGCACTA
AAACATTTTA GTGCAGCTAT AAATTATATT AAAAATCCTT CTGACTTAGA ACAAATAAAT
GTTTACATAA AACGGCTAAG AAAAGACTTG AACATACATA ATTGA
|
|---|
| Protein sequence | MKKLLGILTF ALIIITLITS AGANSDRIKV KIENKPIEFA MPLQLVGNQL FVPFRETMTL
FGYNVSWDKK TKTAAAIKNH KQITAKVGSR ELTADGKKIS FGAAAYLYKQ RLYVSVQVIE
SGLNKVIKWD SSENTLYISG QNTININVEN SNESVIAVGN NILVNISNKY GVNQINDMIN
DADKILENNN FTEAIGLYEK ILENISSSEN PEEYGRTKVN IGNAYNRLAA IIHEEDNAKK
AMMAYGAALK VSTPEKNTTV YAAAHNGLAY SYIILAQVRD TEKNISKALD SYAQALKIYS
QTTYPQEYAQ IQNNLGKAYI VLSGVKDRQK NLETSILYCN EALNFFTPEK NAWENIRIHN
TLGLIYTGLG MIADTQNNIS KAFKEFNTVL EVCSVDKYPD EYAYVQNNVG QCYGKLSDIK
DREENSIKAI KAYNEALKVI TPEKNAINYA VTNMCLSYAY VRLSEVRDSG ENLTKAAAAC
NESLKVLTIG RYPLSYAGAQ NRLGTVYFSL SDISSKKDNL TKAISAYKEA LKVYTPNKYP
LDYSLNLYSL GKCYRILSEI DHSEANITKA VEMYNEALQI ITFEKYPMYY ADVKNSLGNA
YRYMYSLTFQ MDNLYKSLDA YNEALRVDTF ESQPMSYAVI QCNLAYTYMY LGDVLDDEEI
INKSIQASRE ALKVYKFDKY PLLYADTVIN MGSAYWAMSE VRDTVENLAK TRDSYEESLK
VYTLDKYPLD YAYSQYCIGY VCTAIAEASP SEDTIKKGLE ACQEALKVYT FEEDSRYYIE
VRANQAALYV RLAQLKGSED ILKNSQEIYH ELQSYLTDEN GLINDPGINL DMGFMYYVLS
KLKEKEENLT SAIEVYQKAE TMVQEKDNPA MYAKIQKQLG VCFLEMSDVK DKQENLKKAL
KHFSAAINYI KNPSDLEQIN VYIKRLRKDL NIHN
|
|---|
| |