Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2250 |
Symbol | |
ID | 7310933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2629283 |
End bp | 2629978 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643609181 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002506571 |
Protein GI | 220929662 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACA AAGTTCTTAT AATAGAAGAT GAAGAGAGTA TAAGGGGTTT CTTAAAAATA AACTTCAAAA AGCATAATTT TATTGTTATT GAAGCCGCCA CGGGAGAAGA AGGCCTGTTA AAAGCAAGAC AGGAAAACCC TGATGTTGTG CTGCTAGATG TTATGCTACC CGGAATAAGC GGCTTTCAAG TGTGTGAGAC ACTTAGAAAA GAGATGCCCG ACGTAGGAAT TATAATGCTG ACAGCCAGGG GACAGGATAT AGATAAGATA AAGGGTTTGG AGTATGGTGC TGATGACTAT GTTGTTAAAC CCTTCAATAC TACAGAGCTT ATTCTTAGGG CAAAATCTCT TTTAAGACGT TTGGGCGGCA AAAGTGCAGG AGACAGTAAG GAAGATACCT TAAAGAGTGG TGTATTCAAG CTGGAGCTTT ATTCTCAAAG AGTATTTAAA GAAGATAAGG AGATTCTGCT TACGCCTAAA GAATTTTTCT TATTAAAAAT CTTTTTGGAA AATAAAAATA AGGCTTTTAC AAGAGACGAG CTTTTGGACA AGATATGGGG CTATGATTAT GTTGGAGATA CCAAGATAGT TGATGTCAAC ATAAGAAGAC TGAGAAGCAA GATTGAAGAT AAGGATTCCC ACGGTATGTA TATTGAAACG GTATGGGGTA TAGGGTATAG ATGGCGGAAG GAATAA
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Protein sequence | MENKVLIIED EESIRGFLKI NFKKHNFIVI EAATGEEGLL KARQENPDVV LLDVMLPGIS GFQVCETLRK EMPDVGIIML TARGQDIDKI KGLEYGADDY VVKPFNTTEL ILRAKSLLRR LGGKSAGDSK EDTLKSGVFK LELYSQRVFK EDKEILLTPK EFFLLKIFLE NKNKAFTRDE LLDKIWGYDY VGDTKIVDVN IRRLRSKIED KDSHGMYIET VWGIGYRWRK E
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