| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2140 |
|---|
| Symbol | |
|---|
| ID | 7310836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 2507717 |
|---|
| End bp | 2508928 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643609073 |
|---|
| Product | proposed homoserine kinase |
|---|
| Protein accession | YP_002506464 |
|---|
| Protein GI | 220929555 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3635] Predicted phosphoglycerate mutase, AP superfamily |
|---|
| TIGRFAM ID | [TIGR00306] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form
[TIGR02535] proposed homoserine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATG TTGTGATTCT TGGTGATGGT ATGGCTGATT ATACCATACC TGAACTTGAT
AACAAGACCC CTCTGCAATA CGCAAAAAAG CCGTCAATTG ATATGCTGGC TTCAAAGGGT
ACTGTAGGGC TTGTTCGTAC TGTTCCCGAA GGTATTGCCC CCGGTAGTGA TGCTTGTAAC
CTTTCGGTGA TGGGCTATAA CCCCGAAGTA TATTACACAG GTCGTTCACC TCTTGAGGCT
GTAAGTATGG GAATAGAACT GTCACCTACG GATGTTGCAC TCAGATGTAA TCTTGTACAC
CTTTCCGAAG AAGAATCTGA GTATTCCCAA AAAATAATGA TAGATTACAG TTCAGATGAA
ATTTCAACGG CTGAATCTAA AGTTCTTATT GATGCAGTAA ATAATGCTCT TAAGACTGAG
AACATAGTTT TTCACCCCGG AATAAGCTAC AGGCATTGTG TGGTGTGGAG TAACGGCAGG
ACAGGTCTTG GTTGTACTCC TCCCCACGAT ATTTCCGAGA AAAGGATTTC AGATTTTCTT
CCAAAGGAAG AGTCAGGATT GCTGCTTGAT TTGATGAAGA AAAGTTATGA CATTTTAAAA
GATCATCCCA TAAACCAGGC AAGAAGGGCA AAGGGACTAA GAACCGCAAA CTCCATCTGG
CTTTGGGGCG AAGGTAAGAA ACCTGCTTTG TCTTCTTTCC AGGAAAAATA CCATATAACA
GGAGCAATGG TTTCCGCAGT GGATTTACTT AAAGGTATCG GTATTTGTGC GGGACTTGAT
TCCATTGATG TTGAAGGTGC TACAGGTAAT ATTGATACAA ATTTTATCGG TAAGGCTAAT
GCAGCTATTC AGGCCCTTGA AAGCGGAAAA GATTTTGTTT ACGTACATGT TGAAGCCCCT
GATGAGTGCG GTCACAGACA TGAAATCGAA AACAAGGTCA AGGCCATAGA GTTGTTGGAT
TCACAGGTTG TAAAACCTAT ACTGGAAGGT ATAAGTAAGT ATGATTACCG TGTATTGGTA
CTCCCTGACC ATCCTACGCC TCTTCGCTTA CGCACTCATA CATCCGAACC GGTTCCATTT
ATTATTTATG ACAGCACTAA TGAAATTCAA TCACAGGCTA AGAGCTATGA TGAATTTGAA
GCTAAAAAAT CAGGTGTATT CATAGAAGAC GGTTACAAAT TGATGGATTT GTTAATTAAA
GGAAGTTTTT AA
|
|---|
| Protein sequence | MKYVVILGDG MADYTIPELD NKTPLQYAKK PSIDMLASKG TVGLVRTVPE GIAPGSDACN
LSVMGYNPEV YYTGRSPLEA VSMGIELSPT DVALRCNLVH LSEEESEYSQ KIMIDYSSDE
ISTAESKVLI DAVNNALKTE NIVFHPGISY RHCVVWSNGR TGLGCTPPHD ISEKRISDFL
PKEESGLLLD LMKKSYDILK DHPINQARRA KGLRTANSIW LWGEGKKPAL SSFQEKYHIT
GAMVSAVDLL KGIGICAGLD SIDVEGATGN IDTNFIGKAN AAIQALESGK DFVYVHVEAP
DECGHRHEIE NKVKAIELLD SQVVKPILEG ISKYDYRVLV LPDHPTPLRL RTHTSEPVPF
IIYDSTNEIQ SQAKSYDEFE AKKSGVFIED GYKLMDLLIK GSF
|
|---|
| |