| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2114 |
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| Symbol | |
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| ID | 7310812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 2475259 |
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| End bp | 2477142 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643609048 |
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| Product | putative sensor with HAMP domain |
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| Protein accession | YP_002506439 |
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| Protein GI | 220929530 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.28006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAACA AAATCACTTC AAGTATGTTT TCTAAGATGC TTAGAAGTTT ACAATTTTAC
AAAAACATAT CAATAAAGAA GAAGCTATTG CTCGTAGTAA ATCTGCAAAT TTTAATACCC
CTAATATTTG TAGGATTTTT CGCATATAAG AGTTCTGAAG AAATTATTAA CAGTAAATCC
CTTTCGTACT CAAACGATGT ACTTAGCTCT ATTGGATTAA GGCTTCAGGA TACGGTAACA
AACTTGACTA ACATATCCGG TGATATAAGT ATGGATAAGA ATATATACGA TGCTTTAATC
AGCTATGATA TAGGTAATAA CAATAATAAT TTAACAGAAA CGGGAATTCG AGAAATAGAT
TCCCAGTTAA CCAACCTATT TATAACTGTA AAGGGTAACA GACCAGAAAT CAATTCTATT
TGTATTATAA CTGATAGCGG CTTAGTTTTA CCAAGAAGGT TTCCAAGTAC TGATTCGGAA
CTCAGGTCAG TGGTAAATAG GGAATACTCC AGAATGAGTG AAAAGGCTGA CGAAGTAAGC
AGAAAGGCAG CCTGGTTCTT TGAAACTTCT TCGGGTATAG TAAAGAATGC TTATTTGGTC
AAGAAGGTAT ACAACAGGGA CAATTATACA GAAATAGGAA TGTTGGTTGT CCAAATAAAA
ATGGACTCCT TGAGAGATGT TTTAAAGGGA CTGGAATCCG AGGTTATGCA AAATACTACA
ATACTATCAC CAAACAATGA TATAATTGTT TCCAAAAATA AATCGGCATT GGAAAAATAT
AAAACCATAA TCAAGGATAC GCCGTATGAT CAAGATTCTT TTATAGATCA AGATAATAAT
ATTTTTGTTG CGTATACATA TTTAAAAGAT AATATCAACT GGAGGATAGT TTCGTTTGTT
CCTTTAGATG AATTATATTC GGATGTAAAT AAATTGAGAA ACAAGATAAT CTTGCTTTGT
TTCGGGTCTA TAGTCCTGCT GTCTGTAGTA AGCATTTACA TGTCTTTCGA TATGATAAAA
CCAATAAACA GATTGGTAAA AGCTATGAAA AATATGAACA TTAACAACGT TTCGGATAGT
TATATAGAGA TTGACAGAGG TGATGAACTG GGCTTCCTGC ATAAAACCTT CAATAATATG
GCTAAAGAAA TTGACCACCT TGTTACATGG ATTTACAGGG AGCAGATTAC CCGCAAAGAG
GCGGAATTAA AGGCATTACA ATCACAAATA AACCCTCATT TCCTGTTTAA TACACTGGAA
TCCATAAATT GGATGGCACA ATTAAATAAT GTTCCTGAGA TAAGCAATAT AGTAACTGAC
CTGTCTGCAC TGCTTGAAGC CAGTATTGGA AGGGACGACA GGCTTATACC CATAGAAGAG
GAGTTTATGT ATATAGATAA ATACATATCT CTCTTAAAAC GAAGATTTGA AGATAAAATA
ACGCTGAAAA AAGAAATAGA TCCTCAAGTT TTATATATAA AGATTCCAAG ACTTCTGATA
CAACCGTTAA TCGAAAATGC TGTCTACCAT GGAGTGGAAA GCAGCAGGGA AAAAGGCGTT
ATTATGCTAA ATGCCAGAAT ACAGGGGGAT ACGATACTAT TAGAAGTAAT TGATAACGGT
AACGGAATAT CAAAAGAAGA CCTTCTAAAG TTAAATAAGA GTCTCGAAAT GGATAATGAC
ACATATTTTA AATCTCTTAG AGAAAAGAAA AATAAAAGCA TAGGAATAGA TAACGTAAAT
AGAAGAATCA AACTCTTCTA TGGTGAAAAA TACGGTATCA AAATAGAGAG CAGTATTAAC
ATATTCACTA AAGTAACGGT TTGTTTACCG CTTCAAACAT TCAATACTAA GGAGAGTTAT
TATGTACAAG GTTCTAATAA TTGA
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| Protein sequence | MINKITSSMF SKMLRSLQFY KNISIKKKLL LVVNLQILIP LIFVGFFAYK SSEEIINSKS
LSYSNDVLSS IGLRLQDTVT NLTNISGDIS MDKNIYDALI SYDIGNNNNN LTETGIREID
SQLTNLFITV KGNRPEINSI CIITDSGLVL PRRFPSTDSE LRSVVNREYS RMSEKADEVS
RKAAWFFETS SGIVKNAYLV KKVYNRDNYT EIGMLVVQIK MDSLRDVLKG LESEVMQNTT
ILSPNNDIIV SKNKSALEKY KTIIKDTPYD QDSFIDQDNN IFVAYTYLKD NINWRIVSFV
PLDELYSDVN KLRNKIILLC FGSIVLLSVV SIYMSFDMIK PINRLVKAMK NMNINNVSDS
YIEIDRGDEL GFLHKTFNNM AKEIDHLVTW IYREQITRKE AELKALQSQI NPHFLFNTLE
SINWMAQLNN VPEISNIVTD LSALLEASIG RDDRLIPIEE EFMYIDKYIS LLKRRFEDKI
TLKKEIDPQV LYIKIPRLLI QPLIENAVYH GVESSREKGV IMLNARIQGD TILLEVIDNG
NGISKEDLLK LNKSLEMDND TYFKSLREKK NKSIGIDNVN RRIKLFYGEK YGIKIESSIN
IFTKVTVCLP LQTFNTKESY YVQGSNN
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