Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2086 |
Symbol | |
ID | 7312321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2444069 |
End bp | 2445076 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643609019 |
Product | sodium/calcium exchanger membrane region |
Protein accession | YP_002506411 |
Protein GI | 220929502 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0530] Ca2+/Na+ antiporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0548059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGGACA ACATACTGAT TTTATTACTT AGCCTTGGTA TAATCCTTAC AGGATGTGAG TTGTTTACAA ATGGAATTGA GTGGTTAGGG AAGAATCTCA AGCTTGGAGA CGGAGTTGTA GGGAGCATTT TTTCTGCCGT AGGAACCTGC CTGCCAGAAA CATTAATACC CGTTATTGCA CTGCTTTTTT CCGGAAAACA GAAGGATTCA GTAGATATAG GAATCGGTGC TATTATAGGT GCACCTTTTA TGCTCTCAAC CCTTGCATTT TTTATAACGG GTTTGAGTGT TATAATCTTT GCGGGCAGAC GCCAAACAGG ATTGAAACTG AATACAGACC TGAATATTCT TGGACGGGAT ATTCAATTTT TTGTAATTGT GTATACCGGT GCTGTTTTCG TGTCATTTGT CCCTGTAAAT TTTATCAAGA ATATATCTGC AATATTGCTG ATAGCTGCTT ATGTTTTTTA TGTATTTAAA ACAGTAAACA ACGACAAGGC AAGTAATGAA GATATTGACG ACTTAATATT TGCAAAAACA TTCAAATTTA AAGAAAGTAT CATGGTTATC ATTCTTCAGA TTACTCTCGC TCTTTTCTCA ATAATAATTG GGGCTGAGAT GTTTGTGGGG AATATTAAAG TTGTATCGGG AGTTCTGGGC GTTTCAACAC TTGTCCTTTC AATTATAATT ACACCTATTG CAACAGAGCT TCCTGAAAAA TTTAATAGCG TAATATGGAT AAGCAAAAGC AAGGATACAC TTTCCCTGGG GAATATTTCC GGGGCTATGG TTTTTCAAAG CTGTATACCT TTTTCGATAG GTATTCTCAC AACTGATTGG AAGCTTGATA TAGTAACATT AATAAGTTCT ATGCTGGCAT TGGCTTCCAC ACTTGTAACA TATATCTGGA TTAAAGTTAA AAAGAATTTA ACACCGCTAC CGCTTCTATC GGGTGGTGTA TTTTATGCGG TATTTATTGG CTTTTTGATA CTAAGAGGGT TTAAATAA
|
Protein sequence | MLDNILILLL SLGIILTGCE LFTNGIEWLG KNLKLGDGVV GSIFSAVGTC LPETLIPVIA LLFSGKQKDS VDIGIGAIIG APFMLSTLAF FITGLSVIIF AGRRQTGLKL NTDLNILGRD IQFFVIVYTG AVFVSFVPVN FIKNISAILL IAAYVFYVFK TVNNDKASNE DIDDLIFAKT FKFKESIMVI ILQITLALFS IIIGAEMFVG NIKVVSGVLG VSTLVLSIII TPIATELPEK FNSVIWISKS KDTLSLGNIS GAMVFQSCIP FSIGILTTDW KLDIVTLISS MLALASTLVT YIWIKVKKNL TPLPLLSGGV FYAVFIGFLI LRGFK
|
| |