Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2012 |
Symbol | |
ID | 7310721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2373103 |
End bp | 2374347 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643608945 |
Product | Parallel beta-helix repeat protein |
Protein accession | YP_002506338 |
Protein GI | 220929429 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAT TGAATAAACT ATTTTTTTCA ATACTAATAG TTCTAATGGC AATAGGATTA ATTCCTGTAA ATAGTCAAAA AAATATTGTA TATGCAGAAA CATATAACTC GACAGATACC TCAGTAGAGG CAGATACTAT TCATGTTAGT GGAATTATTT CTGAAAACAC TACATGGACT AACAACTATA CTTATGTAGT TGATGGAACC ATAATTGTTC AACAAGGTGT AAAACTTCAG ATTGATCAAG GAGTAATGGT GAAGTTTACC CGGGGAACAG AAATTGTTGT AAATGGTACA CTGACAGCTT CAGGGACTGA ATTGGACAAA GTTGTATTTA CAAGCAATAA TGATACGGCA TATGGAGGAA GCGAAGTAAC AGGATACTAT GATTACTGGC TTGGAATAAC TGTATCAAGT ACGGGAGAAT TCAATGGTGA TTATATAAAA GTTAGGTATG CAGGGGCAGA TTCCAATTAT TATACTCCTC ATTGTGCAAT TAATGTTCAA GGAAAGCTTA ACCTTACAAA TTCAGAAGTA AGTAACTCTA AAAATTATGG TATATACCTG AATACAAGCT TTGATTCAGC AATAAAAAAC AATAATATAA TTAGTAATCG ATCAACTGGG ATATATATTA ACAACACAAG TGCAGATGCC ACTAATACCA TGGATATTGA GAATAATACC ATATCTGGTA ATGGCGGATG TGGAATTTAT GTATCTCAGG CTGGGACAGG AAATGCTGTA ATAGAAGGAA ATAGGATAGC GGGCAATGGA GGGTCAGGCA TCTATATAGA TATATTTGGG ACAGGAAATT TAAGTGTAAG AAATAACAAT CTGTTAAATA ATACGGAAAG TGGAATATAT GTTTATCTGG GAGGATTAAG TTCATCAATA TTCACAGGAA TAGCCGACAA TACCTATGAA GGAAATACCA TAAGAGGAAC ATTGTGTAAC GGAGTGGGTA TTGGAGGAAA CACAATTGTG GATATAACAC TAAGTAATGC TGTGTACTAT TTAGCTGATT TTGTATTGGT ACCAAACGAT AAAAAATTGA CGGTACAGCC AGGAACAATA ATAAAAAGCA GTTCAAAAGG AAGTAGTATC TACGTATATG GAAAACTCAA TGCCTTGGGA ACGAAAGGCA GTCCTATTGT ATTTACAAGC CATAAAGATG CGGCATATGG AGGAAGTGGG ATAGCCGGAT ACTATGATTA TTGTGACCTT TCCCTGATAA ATTAG
|
Protein sequence | MSKLNKLFFS ILIVLMAIGL IPVNSQKNIV YAETYNSTDT SVEADTIHVS GIISENTTWT NNYTYVVDGT IIVQQGVKLQ IDQGVMVKFT RGTEIVVNGT LTASGTELDK VVFTSNNDTA YGGSEVTGYY DYWLGITVSS TGEFNGDYIK VRYAGADSNY YTPHCAINVQ GKLNLTNSEV SNSKNYGIYL NTSFDSAIKN NNIISNRSTG IYINNTSADA TNTMDIENNT ISGNGGCGIY VSQAGTGNAV IEGNRIAGNG GSGIYIDIFG TGNLSVRNNN LLNNTESGIY VYLGGLSSSI FTGIADNTYE GNTIRGTLCN GVGIGGNTIV DITLSNAVYY LADFVLVPND KKLTVQPGTI IKSSSKGSSI YVYGKLNALG TKGSPIVFTS HKDAAYGGSG IAGYYDYCDL SLIN
|
| |